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以肽为中心的TCR模拟物结合模块的设计与结构

design and structure of a peptide-centric TCR mimic binding module.

作者信息

Householder Karsten D, Xiang Xinyu, Jude Kevin M, Deng Arthur, Obenaus Matthias, Wilson Steven C, Chen Xiaojing, Wang Nan, Garcia K Christopher

机构信息

Department of Molecular and Cellular Physiology, Stanford University School of Medicine; Stanford, CA 94305 USA.

Program in Immunology, Stanford University School of Medicine; Stanford, CA 94305 USA.

出版信息

bioRxiv. 2024 Dec 20:2024.12.16.628822. doi: 10.1101/2024.12.16.628822.

DOI:10.1101/2024.12.16.628822
PMID:39763827
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11702606/
Abstract

T cell receptor (TCR) mimics offer a promising platform for tumor-specific targeting of peptide-MHC in cancer immunotherapy. Here, we designed a α-helical TCR mimic (TCRm) specific for the NY-ESO-1 peptide presented by HLA-A02, achieving high on-target specificity with nanomolar affinity (K = 9.5 nM). The structure of the TCRm/pMHC complex at 2.05 Å resolution revealed a rigid TCR-like docking mode with an unusual degree of focus on the up-facing NY-ESO-1 side chains, suggesting the potential for reduced off-target reactivity. Indeed, a structure-informed screen of 14,363 HLA-A02 peptides correctly predicted two off-target peptides, yet our TCRm maintained a wide therapeutic window as a T cell engager. These results represent a path for precision targeting of tumor antigens with peptide-focused α-helical TCR mimics.

摘要

T细胞受体(TCR)模拟物为癌症免疫治疗中肿瘤特异性靶向肽-MHC提供了一个很有前景的平台。在此,我们设计了一种针对由HLA-A02呈递的NY-ESO-1肽的α-螺旋TCR模拟物(TCRm),以纳摩尔亲和力(K = 9.5 nM)实现了高靶向特异性。TCRm/pMHC复合物在2.05 Å分辨率下的结构揭示了一种类似TCR的刚性对接模式,对向上的NY-ESO-1侧链有着不同寻常程度的聚焦,这表明降低脱靶反应性的潜力。事实上,对14363种HLA-A02肽进行的基于结构的筛选正确预测了两种脱靶肽,但我们的TCRm作为T细胞衔接子仍保持着较宽的治疗窗口。这些结果为利用聚焦肽的α-螺旋TCR模拟物精确靶向肿瘤抗原开辟了一条道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/9fdf1875de88/nihpp-2024.12.16.628822v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/24fb5d9e7cb4/nihpp-2024.12.16.628822v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/8d94d0374350/nihpp-2024.12.16.628822v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/49634de7fa19/nihpp-2024.12.16.628822v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/9fdf1875de88/nihpp-2024.12.16.628822v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/24fb5d9e7cb4/nihpp-2024.12.16.628822v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/8d94d0374350/nihpp-2024.12.16.628822v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/49634de7fa19/nihpp-2024.12.16.628822v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7610/11702606/9fdf1875de88/nihpp-2024.12.16.628822v1-f0004.jpg

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本文引用的文献

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Structural principles of peptide-centric chimeric antigen receptor recognition guide therapeutic expansion.肽中心嵌合抗原受体识别的结构原则指导治疗扩展。
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Tebentafusp: a first-in-class treatment for metastatic uveal melanoma.替贝福司:转移性葡萄膜黑色素瘤的首款一流疗法。
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Understanding a protein fold: The physics, chemistry, and biology of α-helical coiled coils.理解蛋白质折叠:α-螺旋卷曲螺旋的物理、化学和生物学。
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