Yang Qing-Qing, Guo Jun-An, Zhang Ke, Li Si-Hui, Xia Wan-Yu, Wang De-Xian, Xie Lu-Shuang, Wang Jun-Meng, Wu Qiao-Feng
Acupuncture and Moxibustion School, Chengdu University of Traditional Chinese Medicine, Chengdu 610075, China.
College of Intelligent Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu 610075, China.
Int J Mol Sci. 2024 Dec 17;25(24):13506. doi: 10.3390/ijms252413506.
To analyze the role of disulfidptosis in ulcerative colitis (UC), large-scale datasets combined with weighted gene co-expression network analysis (WGCNA) and machine learning were utilized and analyzed. When the hub genes that are associated with UC disease phenotypes and have predictive performance were identified, immune cell infiltration and the CeRNA network were constructed, the role of hub genes in UC pathogenies and biotherapy were investigated, and molecular docking studies and mice-verified tests were carried out to further explore the potential core genes and potential target. Finally, we found 21 DRGs involved in UC pathogenesis, including SLC3A2, FLNA, CAPZB, TLN1, RPN1, etc. Moreover, SLC3A2, TLN1, and RPN1 show a notable correlation with UC inflammatory state, and the expression of DRGs is closely related to the response to UC biotherapy. Our study suggests that disulfidptosis plays a crucial role in the pathogenesis and disease progression of UC. Higher expression of DRGs is commonly observed in moderate to severe UC patients, which may also affect their response to biologic therapies. Among the identified genes, SLC3A2 stands out, providing new insights into the underlying mechanisms of UC and potentially serving as a novel therapeutic target for the treatment of UC.
为分析二硫键介导的细胞焦亡在溃疡性结肠炎(UC)中的作用,利用并分析了大规模数据集结合加权基因共表达网络分析(WGCNA)和机器学习的方法。在鉴定出与UC疾病表型相关且具有预测性能的枢纽基因后,构建免疫细胞浸润和竞争性内源RNA(CeRNA)网络,研究枢纽基因在UC发病机制和生物治疗中的作用,并进行分子对接研究和小鼠验证试验以进一步探索潜在的核心基因和潜在靶点。最后,我们发现21个差异表达基因(DRG)参与UC发病机制,包括溶质载体家族3成员2(SLC3A2)、细丝蛋白A(FLNA)、肌动蛋白结合蛋白β(CAPZB)、纽带蛋白1(TLN1)、核糖体蛋白N1(RPN1)等。此外,SLC3A2、TLN1和RPN1与UC炎症状态显著相关,且DRG的表达与UC生物治疗反应密切相关。我们的研究表明,二硫键介导的细胞焦亡在UC的发病机制和疾病进展中起关键作用。在中度至重度UC患者中通常观察到DRG的高表达,这也可能影响他们对生物治疗的反应。在所鉴定的基因中,SLC3A2尤为突出,为UC的潜在机制提供了新见解,并有可能成为治疗UC的新型治疗靶点。