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关于来自东欧的四个岛屿种群的番茄基因组变异性调查。 (注:原文中“L.”推测可能是指番茄属的某个物种,比如番茄Lycopersicon esculentum Mill. ,这里按“番茄”翻译,但需根据具体文献背景确定准确物种)

Genomic Variability Survey in L., with Reference to Four Insular Populations from Eastern Europe.

作者信息

Mihali Ciprian Valentin, Mizeranschi Alexandru Eugeniu, Ilie Daniela Elena, Cziszter Ludovic-Toma, Neamț Radu Ionel, Anton Andreea Ștefania, Mathe Endre, Pecsenye Bence, Bota Viviane Beatrice, Turcuș Violeta

机构信息

Research and Development Station for Bovine Arad, 310059 Arad, Romania.

Faculty of Medicine, "Vasile Goldiș" Western University from Arad, 310025 Arad, Romania.

出版信息

Int J Mol Sci. 2024 Dec 19;25(24):13593. doi: 10.3390/ijms252413593.

DOI:10.3390/ijms252413593
PMID:39769356
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11677755/
Abstract

Cosmopolitan in the western areas of Europe as well as on other continents, the Ilex genus is interesting for its genetic, phenotypic, and biogeographic variabilities. Its insular/local distribution, according to existing data on the periphery of the central and southern European areas, represents a suitable case study with reference to the adaptive plasticity or acclimatization of the L. species to new climatic conditions. The aim of the present study was to analyze the genetic variability at the genome level in four insular populations of L., i.e., in three spontaneous populations from Romania (RO), Serbia (SR), and Bulgaria (BG) and a cultivated population from Hungary (HU). According to the obtained results, the most genetically similar populations among the four considered in this study were those from SR and RO. Genetic variation overlapped genes that were generally associated with metabolic regulation/transport factors, water, and abiotic stress factors. The analysis of single-nucleotide polymorphisms (SNPs) at the levels of the chloroplast and mitochondrion, from the point of view of their distributions at the gene level, identified two clusters: one that includes the native populations (BG, SR, and RO) and a second one including the cultured population from HU.

摘要

冬青属植物在欧洲西部以及其他各大洲都有分布,因其遗传、表型和生物地理变异性而备受关注。根据中欧和南欧地区周边的现有数据,其岛屿/局部分布是研究冬青属物种对新气候条件的适应性可塑性或驯化的合适案例。本研究的目的是分析四个冬青属岛屿种群的基因组水平遗传变异性,即来自罗马尼亚(RO)、塞尔维亚(SR)和保加利亚(BG)的三个自然种群以及来自匈牙利(HU)的一个栽培种群。根据所得结果,本研究中考虑的四个种群中遗传上最相似的是来自SR和RO的种群。遗传变异重叠的基因通常与代谢调节/转运因子、水分和非生物胁迫因子相关。从叶绿体和线粒体水平的单核苷酸多态性(SNP)在基因水平的分布角度分析,确定了两个聚类:一个包括原生种群(BG、SR和RO),另一个包括来自HU的栽培种群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af63/11677755/8d88b2183515/ijms-25-13593-g006.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af63/11677755/38face3ae976/ijms-25-13593-g004.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af63/11677755/8d88b2183515/ijms-25-13593-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af63/11677755/0bb993bb8768/ijms-25-13593-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af63/11677755/8508b8ee5b2d/ijms-25-13593-g002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af63/11677755/8d88b2183515/ijms-25-13593-g006.jpg

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