Wang Xinyu, Wang Pengna, Zhao Hancheng, He Yingying, Qu Changfeng, Miao Jinlai
Marine Natural Products Research and Development Key Laboratory of Qingdao, First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China.
Laboratory for Marine Drugs and Bioproducts, Qingdao Marine Science and Technology Center, Qingdao 266237, China.
Molecules. 2024 Dec 14;29(24):5911. doi: 10.3390/molecules29245911.
The exploration and exploitation of deep-sea microbial resources is of great scientific value for understanding biological evolution under extreme conditions. Deep-sea microorganisms are critical in the ocean carbon cycle, and marine heterotrophic microorganisms secrete extracellular carbonic anhydrase (CA) to fix inorganic carbon, an important process in climate regulation. Extracellular CA provides a green method for fixing carbon dioxide into stable minerals containing Ca. However, studies on extracellular CA in deep-sea microorganisms are limited. In this study, was isolated from Mariana Trench sediments and three candidate extracellular CA genes (1, 2, and ) were identified by whole genome sequencing. Bioinformatics analyses showed that these CAs have different structural compositions, with the β-CA having α-helix and random coiling, whereas the γ-CA has more random coiling and stretched strands. Heterologous expression in E. coli BL21 (DE3) showed that β-CA2 had the highest enzyme activity, followed by γ-CA and β-CA1. Field emission scanning electron microscopy (FESEM) observations showed that the engineered strains with 2 genes produced deposits that were like those from natural sources. This finding not only provides new perspectives for the utilization of deep-sea microbial resources, but also provides an important scientific basis for the molecular mechanisms of extracellular CAs of deep-sea microbes.
深海微生物资源的勘探与开发对于理解极端条件下的生物进化具有重大科学价值。深海微生物在海洋碳循环中至关重要,海洋异养微生物分泌胞外碳酸酐酶(CA)来固定无机碳,这是气候调节中的一个重要过程。胞外CA为将二氧化碳固定到含Ca的稳定矿物质中提供了一种绿色方法。然而,对深海微生物中胞外CA的研究有限。在本研究中,从马里亚纳海沟沉积物中分离出[具体菌株],并通过全基因组测序鉴定出三个候选胞外CA基因(1、2和[具体基因])。生物信息学分析表明,这些CA具有不同的结构组成,β-CA具有α-螺旋和无规卷曲,而γ-CA具有更多的无规卷曲和伸展链。在大肠杆菌BL21(DE3)中的异源表达表明,β-CA2具有最高的酶活性,其次是γ-CA和β-CA1。场发射扫描电子显微镜(FESEM)观察表明,带有2基因的工程菌株产生的沉积物与天然来源的沉积物相似。这一发现不仅为深海微生物资源的利用提供了新的视角,也为深海微生物胞外CA的分子机制提供了重要的科学依据。