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宏基因组分析揭示水分含量对鄱阳湖湿地土壤微生物群落组成及主要生态功能基因分布的影响

Metagenomic Analysis Revealing the Impact of Water Contents on the Composition of Soil Microbial Communities and the Distribution of Major Ecological Functional Genes in Poyang Lake Wetland Soil.

作者信息

Long Yuxin, Zhang Xiaomei, Peng Xuan, Yang Huilin, Ni Haiyan, Zou Long, Long Zhong'er

机构信息

Nanchang Key Laboratory of Microbial Resources Exploitation & Utilization from Poyang Lake Wetland, College of Life Sciences, Jiangxi Normal University, Nanchang 330022, China.

出版信息

Microorganisms. 2024 Dec 13;12(12):2569. doi: 10.3390/microorganisms12122569.

Abstract

Poyang Lake is the largest freshwater lake in China, which boasts unique hydrological conditions and rich biodiversity. In this study, metagenomics technology was used to sequence the microbial genome of soil samples S1 (sedimentary), S2 (semi-submerged), and S3 (arid) with different water content from the Poyang Lake wetland; the results indicate that the three samples have different physicochemical characteristics and their microbial community structure and functional gene distribution are also different, resulting in separate ecological functions. The abundance of typical ANME archaea and the high abundance of in S1 mutually demonstrate prominent roles in the methane anaerobic oxidation pathway during the methane cycle. In S2, the advantageous bacterial genus with ammonia oxidation function is validated by a large number of nitrification functional genes (), manifesting in that it plays a monumental role in nitrification in the nitrogen cycle. In S3, the dominant bacterial genus confirms a multitude of antibiotic resistance genes, indicating their crucial role in resistance and their emphatic research value for microbial resistance issues. The results above have preliminarily proved the role of soil microbial communities as indicators predicting wetland ecological functions, which will help to better develop plans for restoring ecological balance and addressing climate change.

摘要

鄱阳湖是中国最大的淡水湖,拥有独特的水文条件和丰富的生物多样性。在本研究中,运用宏基因组学技术对鄱阳湖湿地不同含水量的土壤样本S1(沉积)、S2(半淹没)和S3(干旱)的微生物基因组进行测序;结果表明,这三个样本具有不同的理化特性,其微生物群落结构和功能基因分布也不同,从而导致生态功能各异。S1中典型的厌氧甲烷氧化古菌丰度以及 的高丰度相互证明了在甲烷循环的甲烷厌氧氧化途径中发挥着重要作用。在S2中,具有氨氧化功能的优势细菌属通过大量硝化功能基因( )得到验证,表明其在氮循环的硝化作用中发挥着重要作用。在S3中,优势细菌属证实了大量抗生素抗性基因的存在,表明它们在抗性方面的关键作用以及对微生物抗性问题的重要研究价值。上述结果初步证明了土壤微生物群落作为预测湿地生态功能指标的作用,这将有助于更好地制定恢复生态平衡和应对气候变化的计划。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c395/11677957/488ed21639c7/microorganisms-12-02569-g001.jpg

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