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探索基因图谱和共表达模式以阐明Tbx20在心脏生物学中的意义。

Exploring genetic mapping and co-expression patterns to illuminate significance of Tbx20 in cardiac biology.

作者信息

Zhang Dezhong, Shang Xiao, Ji Quanquan, Niu Li

机构信息

Department of Cardiothoracic Surgery, Children's Hospital of Fudan University (XiamenBranch), Xiamen Children's Hospital, Xiamen, 361000, China.

Department of Cardiology, The People´S Hospital of Zouping City, No 22 Huangshan Second Road, Zouping, 256200, Shandong, China.

出版信息

Transgenic Res. 2025 Jan 7;34(1):5. doi: 10.1007/s11248-024-00423-8.

DOI:10.1007/s11248-024-00423-8
PMID:39777589
Abstract

The transcription factor Tbx20 is integral to heart development and plays a significant role in various cardiac diseases. Despite its established importance, the regulatory mechanisms and functional significance of Tbx20 remain incompletely understood. To elucidate these mechanisms, we initially conducted eQTL mapping to identify genetic loci associated with Tbx20 expression in heart tissue from BXD mice. Co-expression and enrichment analyses revealed pathways linked to Tbx20, including dilated cardiomyopathy, hypertrophic cardiomyopathy, and FoxO signaling. Additionally, protein-protein interaction studies identified essential cardiac proteins, such as Myl2 and Myl7, along with upstream regulators like Mef2c. To validate our bioinformatic findings, we performed quantitative reverse transcription polymerase chain reaction (qRT-PCR) to assess the relative mRNA expression levels of TBX20 and Mef2c in the heart tissues of BXD mice compared to their parental strains (B6 and D2). Our results demonstrated significant up-regulation of both TBX20 and Mef2c in the BXD group relative to the parental strains. Conversely, both genes were down-regulated in B6, D2, Control, and Treatment groups when compared to BXD mice. These findings confirm the predicted regulatory roles of TBX20 and Mef2c in cardiac development as suggested by our initial analyses.This study not only reinforces the critical role of Tbx20 in cardiac gene regulation but also highlights its potential as a therapeutic target for cardiovascular disorders. Further investigations into Tbx20 and its interactions will enhance our understanding of heart biology and contribute to the development of targeted therapies for heart diseases.

摘要

转录因子Tbx20对心脏发育至关重要,在多种心脏疾病中发挥重要作用。尽管其重要性已得到确立,但Tbx20的调控机制和功能意义仍未完全明确。为阐明这些机制,我们首先进行了表达数量性状基因座(eQTL)定位,以确定与BXD小鼠心脏组织中Tbx20表达相关的基因位点。共表达和富集分析揭示了与Tbx20相关的通路,包括扩张型心肌病、肥厚型心肌病和FoxO信号通路。此外,蛋白质-蛋白质相互作用研究确定了重要的心脏蛋白,如Myl2和Myl7,以及上游调节因子,如Mef2c。为验证我们的生物信息学研究结果,我们进行了定量逆转录聚合酶链反应(qRT-PCR),以评估BXD小鼠心脏组织中TBX20和Mef2c相对于其亲本品系(B6和D2)的相对mRNA表达水平。我们的结果表明,相对于亲本品系,BXD组中TBX20和Mef2c均显著上调。相反,与BXD小鼠相比,B6、D2、对照组和治疗组中这两个基因均下调。这些发现证实了我们初步分析所提示的TBX20和Mef2c在心脏发育中的预测调控作用。本研究不仅强化了Tbx20在心脏基因调控中的关键作用,还突出了其作为心血管疾病治疗靶点的潜力。对Tbx20及其相互作用的进一步研究将增进我们对心脏生物学的理解,并有助于开发针对心脏病的靶向治疗方法。

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