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小麦抗旱性遗传基础的QTL剖析:一项荟萃分析

Dissection of QTLs underlying the genetic basis of drought resistance in wheat: a meta-analysis.

作者信息

Shakir Arif Mehmood, Geng Miaomiao, Tian Jiahao, Wang Ruihui

机构信息

College of Agronomy, Hebei Agricultural University, Baoding, 071000, Hebei, China.

State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agriculture University, Baoding, 071000, Hebei, China.

出版信息

Theor Appl Genet. 2025 Jan 9;138(1):25. doi: 10.1007/s00122-024-04811-w.

DOI:10.1007/s00122-024-04811-w
PMID:39786445
Abstract

Wheat (Triticum aestivum L.) is one of the most important cereal crops, with its grain serving as a predominant staple food source on a global scale. However, there are many biotic and abiotic stresses challenging the stability of wheat production. Among the abiotic stresses, drought is recognized as a significant stress and poses a substantial threat to food production and quality throughout the world. Raising drought tolerance of wheat varieties through genetic regulation is therefore considered as one of the most effective ways to combat the challenges caused by drought stress. Meta-QTL analysis has demonstrated its effectiveness in identifying consensus QTL regions in wheat drought resistance in numerous instances. In this study, we present a comprehensive meta-analysis aimed at unraveling the drought tolerance genetic basis associated with agronomic traits in bread wheat. Extracting data from 34 previously published studies, we aggregated a corpus of 1291 Quantitative Trait Loci (QTL) pertinent to wheat drought tolerance. Then, the translation of the consensus genetic map yielded a comprehensive compendium of 49 distinct MQTLs, each associated with diverse agronomic traits. Prominently featured among the MQTLs were MQTLs 1.1, 1.7, 1.8 (1D), 4.1 (4A), 4.6 (4D), 5.2 (5B), 6.6 (6B), and 7.2 (7B), distinguished as pivotal MQTLs offering significant potential for application in marker-assisted breeding endeavors. Altogether, a total of 66 putative candidate genes (CGs)-related drought tolerance were identified. This work illustrates a translational research approach in transferring information from published mapping studies to genomic regions hosting major QTLs governing key agronomical traits in wheat.

摘要

小麦(Triticum aestivum L.)是最重要的谷类作物之一,其籽粒是全球主要的主食来源。然而,有许多生物和非生物胁迫挑战着小麦生产的稳定性。在非生物胁迫中,干旱被认为是一种严重的胁迫,对全球粮食生产和质量构成重大威胁。因此,通过基因调控提高小麦品种的耐旱性被认为是应对干旱胁迫挑战的最有效方法之一。元QTL分析已在许多情况下证明其在鉴定小麦抗旱性共有QTL区域方面的有效性。在本研究中,我们进行了一项全面的元分析,旨在揭示与面包小麦农艺性状相关的耐旱遗传基础。从34项先前发表的研究中提取数据,我们汇总了1291个与小麦耐旱性相关的数量性状位点(QTL)。然后,对共有遗传图谱的翻译产生了一份包含49个不同MQTL的综合纲要,每个MQTL都与不同的农艺性状相关。在MQTL中,突出的有MQTL 1.1、1.7、1.8(1D)、4.1(4A)、4.6(4D)、5.2(5B)、6.6(6B)和7.2(7B),被视为关键MQTL,在标记辅助育种工作中具有显著的应用潜力。总共鉴定出66个与耐旱性相关的推定候选基因(CG)。这项工作展示了一种转化研究方法,即将已发表的定位研究中的信息转移到控制小麦关键农艺性状的主要QTL所在的基因组区域。

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本文引用的文献

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Genome-wide identification and expression analysis of the GRAS gene family under abiotic stresses in wheat (Triticum aestivum L.).小麦(Triticum aestivum L.)非生物胁迫下 GRAS 基因家族的全基因组鉴定和表达分析。
Sci Rep. 2023 Oct 31;13(1):18705. doi: 10.1038/s41598-023-45051-0.
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Meta-QTLs, ortho-meta QTLs and related candidate genes for yield and its component traits under water stress in wheat ( L.).小麦(L.)在水分胁迫下产量及其构成性状的元QTL、直系元QTL及相关候选基因
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Morpho-Physiological and Hormonal Response of Winter Wheat Varieties to Drought Stress at Stem Elongation and Anthesis Stages.
冬小麦品种在拔节期和抽穗期对干旱胁迫的形态生理及激素响应
Plants (Basel). 2023 Jan 17;12(3):418. doi: 10.3390/plants12030418.
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QTL and Candidate Genes: Techniques and Advancement in Abiotic Stress Resistance Breeding of Major Cereals.数量性状位点(QTL)和候选基因:主要谷物抗非生物胁迫育种的技术和进展。
Int J Mol Sci. 2022 Dec 20;24(1):6. doi: 10.3390/ijms24010006.
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A comprehensive meta-QTL analysis for yield-related traits of durum wheat ( L. var. ) grown under different water regimes.对不同水分条件下种植的硬粒小麦(L. var.)产量相关性状进行的全面元QTL分析。
Front Plant Sci. 2022 Sep 6;13:984269. doi: 10.3389/fpls.2022.984269. eCollection 2022.
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A HST1-like gene controls tiller angle through regulating endogenous auxin in common wheat.一个 HST1 样基因通过调节普通小麦内源生长素控制分蘖角度。
Plant Biotechnol J. 2023 Jan;21(1):122-135. doi: 10.1111/pbi.13930. Epub 2022 Oct 14.
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Evolution and origin of bread wheat.小麦的进化和起源。
Plant Cell. 2022 Jul 4;34(7):2549-2567. doi: 10.1093/plcell/koac130.
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Identification of Genetic Loci Affecting Flag Leaf Chlorophyll in Wheat Grown under Different Water Regimes.不同水分条件下生长的小麦中影响旗叶叶绿素的基因位点鉴定
Front Genet. 2022 Mar 15;13:832898. doi: 10.3389/fgene.2022.832898. eCollection 2022.
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Genome-Wide Expression Analysis of Root Tips in Contrasting Rice Genotypes Revealed Novel Candidate Genes for Water Stress Adaptation.不同水稻基因型根尖的全基因组表达分析揭示了适应水分胁迫的新候选基因。
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Meta-QTLs, ortho-MQTLs and candidate genes for nitrogen use efficiency and root system architecture in bread wheat ( L.).面包小麦(L.)中氮素利用效率和根系结构的Meta-QTLs、直系同源MQTLs及候选基因
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