Glöckle Anna, Schuler Sebastian, Einsiedler Manuel, Gulder Tobias A M
Chair of Technical Biochemistry, Technische Universität Dresden, Bergstraße 66, 01069, Dresden, Germany.
Department of Natural Product Biotechnology, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Centre for Infection Research (HZI) and Department of Pharmacy at Saarland University, PharmaScienceHub (PSH), Campus E8.1, 66123, Saarbrücken, Germany.
Microb Cell Fact. 2025 Jan 10;24(1):13. doi: 10.1186/s12934-024-02630-8.
The biosynthesis of the natural product family of the polycyclic tetramate macrolactams (PoTeMs) employs an uncommon iterative polyketide synthase/non-ribosomal peptide synthetase (iPKS/NRPS). This machinery produces a universal PoTeM biosynthetic precursor that contains a tetramic acid moiety connected to two unsaturated polyene side chains. The enormous structural and hence functional diversity of PoTeMs is enabled by pathway-specific tailoring enzymes, particularly cyclization-catalyzing oxidases that process the polyene chains to form distinct ring systems, and further modifying enzymes.
Ikarugamycin is the first discovered PoTeM and is formed by the three enzymes IkaABC. Utilizing the iPKS/NRPS IkaA, we established a genetic plug-and-play system by screening eight different strong promoters downstream of ikaA to facilitate high-level heterologous expression of PoTeMs in different Streptomyces host systems. Furthermore, we applied the system on three different PoTeM modifying genes (ptmD, ikaD, and cftA), showing the general utility of this approach to study PoTeM post-PKS/NRPS processing of diverse tailoring enzymes.
By employing our plug-and-play system for PoTeMs, we reconstructed the ikarugamycin biosynthesis and generated five derivatives of ikarugamycin. This platform will generally facilitate the investigation of new PoTeM biosynthetic cyclization and tailoring reactions in the future.
多环四胺大环内酯类天然产物家族(PoTeMs)的生物合成采用了一种罕见的迭代聚酮合酶/非核糖体肽合成酶(iPKS/NRPS)。该机制产生一种通用的PoTeM生物合成前体,其包含与两个不饱和多烯侧链相连的四胺酸部分。PoTeMs巨大的结构及功能多样性是由途径特异性修饰酶实现的,特别是催化多烯链环化以形成不同环系的环化氧化酶,以及其他修饰酶。
伊卡鲁霉素是首个被发现的PoTeM,由IkaABC三种酶形成。利用iPKS/NRPS的IkaA,我们通过筛选ikaA下游的八个不同强启动子,建立了一个基因即插即用系统,以促进PoTeMs在不同链霉菌宿主系统中的高水平异源表达。此外,我们将该系统应用于三个不同的PoTeM修饰基因(ptmD、ikaD和cftA),证明了这种方法在研究PoTeM在PKS/NRPS后不同修饰酶加工过程中的普遍实用性。
通过采用我们的PoTeMs即插即用系统,我们重建了伊卡鲁霉素的生物合成并产生了五种伊卡鲁霉素衍生物。该平台将在未来普遍促进对新的PoTeM生物合成环化和修饰反应的研究。