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应用人工智能揭示凝血因子的基因图谱。

Applying artificial intelligence to uncover the genetic landscape of coagulation factors.

作者信息

Soldà Giulia, Asselta Rosanna

机构信息

Department of Biomedical Sciences, Humanitas University, Pieve Emanuele, Milan, Italy; IRCCS Humanitas Research Hospital, Medical Genetics and RNA Biology Unit, Rozzano, Milan, Italy.

Department of Biomedical Sciences, Humanitas University, Pieve Emanuele, Milan, Italy; IRCCS Humanitas Research Hospital, Medical Genetics and RNA Biology Unit, Rozzano, Milan, Italy.

出版信息

J Thromb Haemost. 2025 Apr;23(4):1133-1145. doi: 10.1016/j.jtha.2024.12.030. Epub 2025 Jan 9.

DOI:10.1016/j.jtha.2024.12.030
PMID:39798926
Abstract

Artificial intelligence (AI) is rapidly advancing our ability to identify and interpret genetic variants associated with coagulation factor deficiencies. This review introduces AI, with a specific focus on machine learning (ML) methods, and examines its applications in the field of coagulation genetics over the past decade. We observed a significant increase in AI-related publications, with a focus on hemophilia A and B. ML approaches have shown promise in predicting the functional impact of genetic variants and establishing genotype-phenotype correlations, exemplified by tools like "Hema-Class" for factor VIII variants. However, some challenges remain, including the need to expand variant selection beyond missense mutations (which is now the standard of most studies). For the future, the integration of AI in calling, detecting, and interpreting genetic variants can significantly improve our ability to process large-scale genomic data. In this frame, we discuss various AI/ML-based tools for genetic variant detection and interpretation, highlighting their strengths and limitations. As the field evolves, the synergistic application of multiple AI models, coupled with rigorous validation strategies, will be crucial in advancing our understanding of coagulation disorders and for personalizing treatment approaches.

摘要

人工智能(AI)正在迅速提升我们识别和解读与凝血因子缺乏相关的基因变异的能力。本综述介绍了人工智能,特别关注机器学习(ML)方法,并审视了其在过去十年中在凝血遗传学领域的应用。我们观察到与人工智能相关的出版物显著增加,重点是甲型和乙型血友病。机器学习方法在预测基因变异的功能影响和建立基因型-表型相关性方面已显示出前景,以用于因子VIII变异的“Hema-Class”等工具为例。然而,一些挑战仍然存在,包括需要将变异选择范围扩大到错义突变之外(目前大多数研究的标准)。展望未来,人工智能在基因变异的识别、检测和解读中的整合可以显著提高我们处理大规模基因组数据的能力。在此框架下,我们讨论了各种基于人工智能/机器学习的基因变异检测和解读工具,突出了它们的优势和局限性。随着该领域的发展,多种人工智能模型的协同应用,再加上严格的验证策略,对于推进我们对凝血障碍的理解以及实现个性化治疗方法将至关重要。

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引用本文的文献

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Artificial Intelligence in the Management of Hereditary and Acquired Hemophilia: From Genomics to Treatment Optimization.人工智能在遗传性和获得性血友病管理中的应用:从基因组学到治疗优化
Int J Mol Sci. 2025 Jun 25;26(13):6100. doi: 10.3390/ijms26136100.