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使用逆概率加权法提高队列中的代表性。

Increasing Representativeness in the Cohort Using Inverse Probability Weighting.

作者信息

Kambara Manoj S, Sharma Shivam, Spouge John L, Jordan I King, Mariño-Ramírez Leonardo

机构信息

National Institute on Minority Health and Health Disparities, National Institutes of Health, Bethesda, Maryland, USA.

IHRC-Georgia Tech Applied Bioinformatics Laboratory, Atlanta, Georgia, USA.

出版信息

medRxiv. 2024 Oct 2:2024.10.02.24314774. doi: 10.1101/2024.10.02.24314774.

DOI:10.1101/2024.10.02.24314774
PMID:39802779
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11722450/
Abstract

Large-scale population biobanks rely on volunteer participants, which may introduce biases that compromise the external validity of epidemiological studies. We characterized the volunteer participant bias for the Research Program cohort and developed a set of inverse probability (IP) weights that can be used to mitigate this bias. The cohort is older, more female, more educated, more likely to be covered by health insurance, less White, less likely to drink or smoke, and less healthy compared to the US population. IP weights developed via comparison of a nationally representative database eliminated the observed biases for all demographic and lifestyle characteristics and reduced the observed disease prevalence differences. IP weights also impact genetic associations with type 2 diabetes across diverse ancestry cohorts. We provide our IP weights as a community resource to increase the representativeness and external validity of the cohort.

摘要

大规模人群生物样本库依赖志愿者参与者,这可能会引入偏差,从而损害流行病学研究的外部有效性。我们对研究项目队列中的志愿者参与者偏差进行了特征描述,并开发了一组逆概率(IP)权重,可用于减轻这种偏差。与美国人群相比,该队列年龄更大、女性更多、受教育程度更高、更有可能享有医疗保险、白人更少、饮酒或吸烟的可能性更小,且健康状况更差。通过比较具有全国代表性的数据库开发的IP权重消除了所有人口统计学和生活方式特征中观察到的偏差,并减少了观察到的疾病患病率差异。IP权重还影响不同祖先队列中与2型糖尿病的遗传关联。我们将我们的IP权重作为社区资源提供,以提高该队列的代表性和外部有效性。

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本文引用的文献

1
Weighting the United States Research Program data to known population estimates using raking.使用加权法根据已知的人口估计值对美国研究项目数据进行加权。
Prev Med Rep. 2024 Jun 8;43:102795. doi: 10.1016/j.pmedr.2024.102795. eCollection 2024 Jul.
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Plan and Operations of the National Health and Nutrition Examination Survey, August 2021-August 2023.国家健康与营养检查调查的计划与实施,2021 年 8 月至 2023 年 8 月。
Vital Health Stat 1. 2024 May(66):1-21.
3
To weight or not to weight? The effect of selection bias in 3 large electronic health record-linked biobanks and recommendations for practice.
是否要进行体重测量?3 个大型电子健康记录相关生物库中的选择偏倚效应及其实践建议。
J Am Med Inform Assoc. 2024 Jun 20;31(7):1479-1492. doi: 10.1093/jamia/ocae098.
4
Reweighting UK Biobank corrects for pervasive selection bias due to volunteering.重新加权英国生物库可以纠正由于志愿参与而产生的普遍选择偏差。
Int J Epidemiol. 2024 Apr 11;53(3). doi: 10.1093/ije/dyae054.
5
The All of Us Research Program is an opportunity to enhance the diversity of US biomedical research.“我们所有人”研究计划是一个增强美国生物医学研究多样性的契机。
Nat Med. 2024 Feb;30(2):330-333. doi: 10.1038/s41591-023-02744-3.
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Genomic data in the All of Us Research Program.全美国研究计划中的基因组数据。
Nature. 2024 Mar;627(8003):340-346. doi: 10.1038/s41586-023-06957-x. Epub 2024 Feb 19.
7
The limitations of large-scale volunteer databases to address inequalities and global challenges in health and aging.大规模志愿者数据库在解决健康和老龄化方面的不平等和全球挑战方面的局限性。
Nat Aging. 2022 Sep;2(9):775-783. doi: 10.1038/s43587-022-00277-x. Epub 2022 Sep 13.
8
Participation bias in the UK Biobank distorts genetic associations and downstream analyses.英国生物库中的参与偏差扭曲了遗传关联和下游分析。
Nat Hum Behav. 2023 Jul;7(7):1216-1227. doi: 10.1038/s41562-023-01579-9. Epub 2023 Apr 27.
9
Design and Implementation of the All of Us Research Program COVID-19 Participant Experience (COPE) Survey.All of Us 研究计划 COVID-19 参与者体验(COPE)调查的设计与实施。
Am J Epidemiol. 2023 Jun 2;192(6):972-986. doi: 10.1093/aje/kwad035.
10
LDAK-GBAT: Fast and powerful gene-based association testing using summary statistics.LDAK-GBAT:使用汇总统计信息进行快速而强大的基于基因的关联测试。
Am J Hum Genet. 2023 Jan 5;110(1):23-29. doi: 10.1016/j.ajhg.2022.11.010. Epub 2022 Dec 7.