• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于基因组组装和转录组比较的地下害虫东方蝼蛄化学感应基因的表征

Characterization of chemosensory genes in the subterranean pest Gryllotalpa Orientalis based on genome assembly and transcriptome comparison.

作者信息

Chudhary Amna, Guan De-Long, Xu Yandi, Jiang Tao, Yang Lulu, Chen Mengyang, Khan Muhammad Salabat, Zhu Wenhui, Xu Sheng-Quan

机构信息

College of Life Sciences, Shaanxi Normal University, Xi'an, 710062, China.

Guangxi Key Lab Sericulture Ecological & Applications Intelligen, Hechi University, Hechi, China.

出版信息

BMC Genomics. 2025 Jan 14;26(1):33. doi: 10.1186/s12864-025-11217-5.

DOI:10.1186/s12864-025-11217-5
PMID:39810101
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11731388/
Abstract

BACKGROUND

Chemosensory perception plays a vital role in insect survival and adaptability, driving essential behaviours such as navigation, mate identification, and food location. This sensory process is governed by diverse gene families, including odorant-binding proteins (OBPs), olfactory receptors (ORs), ionotropic receptors (IRs), chemosensory proteins (CSPs), gustatory receptors (GRs), and sensory neuron membrane proteins (SNMPs). The oriental mole cricket (Gryllotalpa orientalis Burmeister), an invasive pest with an underground, phyllophagous lifestyle, causes substantial crop damage. This study characterizes the chemosensory gene repertoire of G. orientalis based on de novo genome assembly and transcriptomic analysis.

RESULTS

We present a draft genome of G. orientalis at the scaffold level, spanning 2.94 Gb and comprising 10,497 scaffolds. This assembly encodes 19,155 protein-coding genes, including 158 chemosensory genes: 30 odorant receptors (ORs), 64 ionotropic receptors (IRs), ten gustatory receptors (GRs), 28 odorant-binding proteins (OBPs), 25 chemosensory proteins (CSPs), and a single sensory neuron membrane protein (SNMP). Expression analysis indicated that 71 chemosensory genes were actively expressed in the head, thorax, and legs, with ORs and OBPs showing higher expression in the head and legs. In contrast, GRs and IRs were predominantly expressed in the head.

CONCLUSIONS

This study provides the first comprehensive identification of chemosensory gene families in the G. orientalis genome, characterized as a scaffold-level draft genome. These findings provide a basis for future functional studies and highlight the role of chemoreception in the subterranean environment.

摘要

背景

化学感应在昆虫的生存和适应性中起着至关重要的作用,驱动着诸如导航、配偶识别和食物定位等基本行为。这一感觉过程由多种基因家族调控,包括气味结合蛋白(OBP)、嗅觉受体(OR)、离子型受体(IR)、化学感应蛋白(CSP)、味觉受体(GR)和感觉神经元膜蛋白(SNMP)。东方蝼蛄(Gryllotalpa orientalis Burmeister)是一种具有地下食叶生活方式的入侵害虫,会对农作物造成严重损害。本研究基于从头基因组组装和转录组分析,对东方蝼蛄的化学感应基因库进行了表征。

结果

我们展示了东方蝼蛄支架水平的基因组草图,跨度为2.94 Gb,包含10497个支架。该组装编码19155个蛋白质编码基因,其中包括158个化学感应基因:30个气味受体(OR)、64个离子型受体(IR)、10个味觉受体(GR)、28个气味结合蛋白(OBP)、25个化学感应蛋白(CSP)和1个感觉神经元膜蛋白(SNMP)。表达分析表明,71个化学感应基因在头部、胸部和腿部活跃表达,其中OR和OBP在头部和腿部表达较高。相比之下,GR和IR主要在头部表达。

结论

本研究首次全面鉴定了东方蝼蛄基因组中的化学感应基因家族,其基因组特征为支架水平的草图。这些发现为未来的功能研究提供了基础,并突出了化学感受在地下环境中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/0a1ef1c2674c/12864_2025_11217_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/11cd087232f8/12864_2025_11217_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/c9efc111ba42/12864_2025_11217_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/39f3e481fa7a/12864_2025_11217_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/ae06a0333cf3/12864_2025_11217_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/798503b7efe3/12864_2025_11217_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/0826953a744b/12864_2025_11217_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/825e46ef3e2a/12864_2025_11217_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/0a1ef1c2674c/12864_2025_11217_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/11cd087232f8/12864_2025_11217_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/c9efc111ba42/12864_2025_11217_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/39f3e481fa7a/12864_2025_11217_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/ae06a0333cf3/12864_2025_11217_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/798503b7efe3/12864_2025_11217_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/0826953a744b/12864_2025_11217_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/825e46ef3e2a/12864_2025_11217_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c51a/11731388/0a1ef1c2674c/12864_2025_11217_Fig8_HTML.jpg

相似文献

1
Characterization of chemosensory genes in the subterranean pest Gryllotalpa Orientalis based on genome assembly and transcriptome comparison.基于基因组组装和转录组比较的地下害虫东方蝼蛄化学感应基因的表征
BMC Genomics. 2025 Jan 14;26(1):33. doi: 10.1186/s12864-025-11217-5.
2
Identification and sex expression profiles of candidate chemosensory genes from Atherigona orientalis via the antennae and leg transcriptome analysis.通过触角和腿转录组分析鉴定东方粘虫候选化学感觉基因及其性别表达特征。
Comp Biochem Physiol Part D Genomics Proteomics. 2024 Jun;50:101222. doi: 10.1016/j.cbd.2024.101222. Epub 2024 Feb 27.
3
Genome-wide identification and characterization of the chemosensory relative protein genes in Rhus gall aphid Schlechtendalia chinensis.中国漆圆蚧化感相对蛋白基因的全基因组鉴定与特征分析。
BMC Genomics. 2023 Apr 28;24(1):222. doi: 10.1186/s12864-023-09322-4.
4
Identification of the genes involved in odorant reception and detection in the palm weevil Rhynchophorus ferrugineus, an important quarantine pest, by antennal transcriptome analysis.通过触角转录组分析鉴定重要检疫害虫锈色棕榈象(Rhynchophorus ferrugineus)中参与气味接收和检测的基因。
BMC Genomics. 2016 Jan 22;17:69. doi: 10.1186/s12864-016-2362-6.
5
Identification and characterization of chemosensory genes in the antennal transcriptome of Spodoptera exigua.鉴定和分析甜菜夜蛾触角转录组中的化学感受基因。
Comp Biochem Physiol Part D Genomics Proteomics. 2018 Sep;27:54-65. doi: 10.1016/j.cbd.2018.05.001. Epub 2018 May 7.
6
Identification and Characterization of Candidate Chemosensory Gene Families from Spodoptera exigua Developmental Transcriptomes.从甜菜夜蛾发育转录组中鉴定和表征候选化学感应基因家族
Int J Biol Sci. 2015 Jul 15;11(9):1036-48. doi: 10.7150/ijbs.12020. eCollection 2015.
7
Genomic content of chemosensory genes correlates with host range in wood-boring beetles (Dendroctonus ponderosae, Agrilus planipennis, and Anoplophora glabripennis).化学感受基因的基因组内容与钻蛀性甲虫(包括美洲山松大小蠹、平腹小蜂和光肩星天牛)的宿主范围相关。
BMC Genomics. 2019 Sep 2;20(1):690. doi: 10.1186/s12864-019-6054-x.
8
Identification and characterization of chemosensory gene families in the bark beetle, Tomicus yunnanensis.鉴定和分析云南木蠹象的化学感受基因家族。
Comp Biochem Physiol Part D Genomics Proteomics. 2018 Mar;25:73-85. doi: 10.1016/j.cbd.2017.11.003. Epub 2017 Nov 24.
9
Antennal transcriptome analysis of olfactory genes and tissue expression profiling of odorant binding proteins in Semanotus bifasciatus (cerambycidae: coleoptera).双叉犀金龟触角转录组分析及气味结合蛋白的组织表达谱研究(鞘翅目:金龟子科)。
BMC Genomics. 2022 Jun 22;23(1):461. doi: 10.1186/s12864-022-08655-w.
10
Transcriptome analysis and identification of chemosensory genes in the larvae of Plagiodera versicolora.转录组分析及甘蓝夜蛾幼虫化感器基因的鉴定
BMC Genomics. 2022 Dec 22;23(1):845. doi: 10.1186/s12864-022-09079-2.

本文引用的文献

1
Genomic identification and evolutionary analysis of chemosensory receptor gene families in two Phthorimaea pest species: insights into chemical ecology and host adaptation.两种番茄夜蛾化学感受受体基因家族的基因组鉴定与进化分析:对化学生态学和寄主适应性的深入了解。
BMC Genomics. 2024 May 18;25(1):493. doi: 10.1186/s12864-024-10428-6.
2
De novo assembly and annotation of Popillia japonica's genome with initial clues to its potential as an invasive pest.日本虎杖基因组从头组装和注释及其作为入侵害虫的潜在性的初步线索。
BMC Genomics. 2024 Mar 13;25(1):275. doi: 10.1186/s12864-024-10180-x.
3
Highly dynamic evolution of the chemosensory system driven by gene gain and loss across subterranean beetles.
基因增益和缺失驱动地下甲虫化感系统的高度动态进化。
Mol Phylogenet Evol. 2024 May;194:108027. doi: 10.1016/j.ympev.2024.108027. Epub 2024 Feb 14.
4
Single-cell and transcriptomic analyses reveal the influence of diabetes on ovarian cancer.单细胞和转录组分析揭示糖尿病对卵巢癌的影响。
BMC Genomics. 2024 Jan 2;25(1):1. doi: 10.1186/s12864-023-09893-2.
5
Genome-wide identification and characterization of the chemosensory relative protein genes in Rhus gall aphid Schlechtendalia chinensis.中国漆圆蚧化感相对蛋白基因的全基因组鉴定与特征分析。
BMC Genomics. 2023 Apr 28;24(1):222. doi: 10.1186/s12864-023-09322-4.
6
De Novo Assembly and Characterization of the Transcriptome of an Omnivorous Camel Cricket ().从头组装和鉴定杂食性驼螽转录组()。
Int J Mol Sci. 2023 Feb 16;24(4):4005. doi: 10.3390/ijms24044005.
7
Genome Survey Sequencing of the Mole Cricket .直翅目昆虫基因组调查测序。
Genes (Basel). 2023 Jan 18;14(2):255. doi: 10.3390/genes14020255.
8
Involvement of three chemosensory proteins in perception of host plant volatiles in the tea green leafhopper, .三种化学感受蛋白参与茶小绿叶蝉对寄主植物挥发物的感知
Front Physiol. 2023 Jan 4;13:1068543. doi: 10.3389/fphys.2022.1068543. eCollection 2022.
9
Nanopore sequencing for detecting reciprocal translocation carrier status in preimplantation genetic testing.利用纳米孔测序技术检测胚胎植入前遗传学检测中的相互易位携带者状态。
BMC Genomics. 2023 Jan 2;24(1):1. doi: 10.1186/s12864-022-09103-5.
10
Odorant Binding Proteins (OBPs) and Odorant Receptors (ORs) of Anopheles stephensi: Identification and comparative insights.斯氏按蚊气味结合蛋白(OBPs)和气味受体(ORs):鉴定与比较分析。
PLoS One. 2022 Mar 22;17(3):e0265896. doi: 10.1371/journal.pone.0265896. eCollection 2022.