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巨型KASH蛋白和核糖体协同建立细胞质生物物理特性。

Giant KASH proteins and ribosomes synergistically establish cytoplasmic biophysical properties .

作者信息

Ding Xiangyi, Hao Hongyan, Elnatan Daniel, Alinaya Patrick Neo, Kalra Shilpi, Kaur Abby, Kumari Sweta, Holt Liam J, Luxton G W Gant, Starr Daniel A

机构信息

Department of Molecular and Cellular Biology, University of California, Davis; Davis, CA, USA.

Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine; New Yor, NY, USA.

出版信息

bioRxiv. 2025 Jan 12:2025.01.10.632479. doi: 10.1101/2025.01.10.632479.

DOI:10.1101/2025.01.10.632479
PMID:39829784
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11741440/
Abstract

Understanding how cells control their biophysical properties during development remains a fundamental challenge. While cytoplasmic macromolecular crowding affects multiple cellular processes in single cells, its regulation in living animals remains poorly understood. Using genetically encoded multimeric nanoparticles for rheology, we discovered that tissues maintain distinct cytoplasmic biophysical properties that differ from those observed across diverse systems, including bacteria, yeast species, and cultured mammalian cells. We identified two conserved mechanisms controlling cytoplasmic macromolecular diffusion: ribosome concentration, a known regulator of cytoplasmic crowding, works in concert with a previously unknown function for the giant KASH protein ANC-1 scaffolding the endoplasmic reticulum. These findings reveal mechanisms by which tissues establish and maintain distinct cytoplasmic biophysical properties, with implications for understanding cellular organization across species.

摘要

了解细胞在发育过程中如何控制其生物物理特性仍然是一项根本性挑战。虽然细胞质大分子拥挤会影响单细胞中的多个细胞过程,但对其在活体动物中的调节仍知之甚少。利用基因编码的多聚体纳米颗粒进行流变学研究,我们发现组织维持着与在包括细菌、酵母物种和培养的哺乳动物细胞在内的多种系统中观察到的不同的独特细胞质生物物理特性。我们确定了两种控制细胞质大分子扩散的保守机制:核糖体浓度(一种已知的细胞质拥挤调节因子)与巨大的KASH蛋白ANC-1(其具有内质网支架的此前未知功能)协同发挥作用。这些发现揭示了组织建立和维持独特细胞质生物物理特性的机制,对理解跨物种的细胞组织具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/65d72c19711c/nihpp-2025.01.10.632479v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/8eac1e47dd7d/nihpp-2025.01.10.632479v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/b63ae1cbe95e/nihpp-2025.01.10.632479v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/7e23ceb00266/nihpp-2025.01.10.632479v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/65d72c19711c/nihpp-2025.01.10.632479v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/8eac1e47dd7d/nihpp-2025.01.10.632479v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/b63ae1cbe95e/nihpp-2025.01.10.632479v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/7e23ceb00266/nihpp-2025.01.10.632479v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc92/11741440/65d72c19711c/nihpp-2025.01.10.632479v1-f0004.jpg

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本文引用的文献

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Proc Natl Acad Sci U S A. 2025 Jan 28;122(4):e2406340121. doi: 10.1073/pnas.2406340121. Epub 2025 Jan 24.
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Polysome collapse and RNA condensation fluidize the cytoplasm.多核糖体崩溃和 RNA 凝聚使细胞质流动。
Mol Cell. 2024 Jul 25;84(14):2698-2716.e9. doi: 10.1016/j.molcel.2024.06.024.
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How it feels in a cell.细胞内的感受
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Vast heterogeneity in cytoplasmic diffusion rates revealed by nanorheology and Doppelgänger simulations.纳米流变学和 Doppelgänger 模拟揭示细胞质扩散率的巨大异质性。
Biophys J. 2023 Mar 7;122(5):767-783. doi: 10.1016/j.bpj.2023.01.040. Epub 2023 Feb 3.
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Physical properties of the cytoplasm modulate the rates of microtubule polymerization and depolymerization.细胞质的物理性质调节微管聚合和去聚合的速度。
Dev Cell. 2022 Feb 28;57(4):466-479.e6. doi: 10.1016/j.devcel.2022.02.001.
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FRAP: A Powerful Method to Evaluate Membrane Fluidity in .荧光恢复动力学分析(FRAP):一种评估……中膜流动性的强大方法
Bio Protoc. 2018 Jul 5;8(13):e2913. doi: 10.21769/BioProtoc.2913.
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A Caenorhabditis elegans ortholog of human selenium-binding protein 1 is a pro-aging factor protecting against selenite toxicity.秀丽隐杆线虫的人类硒结合蛋白 1 的同源物是一种抗衰老因子,可防止亚硒酸盐毒性。
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