利用机器学习和列线图模型辅助预测错配修复缺陷(dMMR)的胃癌患者胃切除术后的无进展生存期。
Harnessing Machine Learning and Nomogram Models to Aid in Predicting Progression-Free Survival for Gastric Cancer Patients Post-Gastrectomy with Deficient Mismatch Repair(dMMR).
作者信息
Li Yifan, Ma JinFeng, Cheng Wenhua
机构信息
Hepatobiliary, Pancreatic and Gastrointestinal Surgery, Shanxi Hospital Affiliated to Carcinoma Hospital, Chinese Academy of Medical Sciences, Shanxi Province Carcinoma Hospital, Carcinoma Hospital Affiliated to Shanxi Medical University, Taiyuan, Shanxi, 030013, People's Republic of China.
Department of Gastroenterology, Shanxi Hospital Affiliated to Carcinoma Hospital, Chinese Academy of Medical SciencesShanxi Province Carcinoma Hospital, Carcinoma Hospital Affiliated to Shanxi Medical University, Taiyuan, Shanxi, 030013, People's Republic of China.
出版信息
BMC Cancer. 2025 Jan 24;25(1):141. doi: 10.1186/s12885-025-13542-0.
OBJECTIVE
To assess the effectiveness of a machine learning framework and nomogram in predicting progression-free survival (PFS) post-radical gastrectomy in patients with dMMR.
METHOD
Machine learning models and nomograms to forecast PFS in patients undergoing radical gastrectomy for nonmetastatic gastric cancer with dMMR. Independent risk factors were identified using Cox regression analysis to develop the nomogram. The performance of the models was assessed through C-index, time receiver operating characteristic (T-ROC) curves, calibration curves, and decision curve analysis (DCA) curves. Subsequently, patients were categorized into high-risk and low-risk groups based on the nomogram's risk scores.
RESULTS
Among the 582 patients studied, machine learning models exhibited higher c-index values than the nomogram. Random Survival Forests (RSF) demonstrated the highest c-index (0.968), followed by Extreme Gradient Boosting (XG boosting, 0.945), Decision Survival Tree (DST, 0.924), the nomogram (0.808), and 8th TNM staging (0.757). All models showed good calibration with low integrated Brier scores (< 0.1), although there was calibration drift over time, particularly in the traditional nomogram model. DCA showed an incremental net benefit from all machine learning models compared with conventional models currently used in practice. Age, positive lymph nodes, neural invasion, and Ki67 were identified as key factors and integrated into the prognostic nomogram.
CONCLUSION
Our research has demonstrated the effectiveness of the RSF algorithm in accurately predicting progression-free survival (PFS) in dMMR gastric cancer patients after gastrectomy. The nomogram created from this algorithm has proven to be a valuable tool in identifying high-risk patients, providing clinicians with important information for postoperative monitoring and personalized treatment strategies.
目的
评估机器学习框架和列线图预测错配修复缺陷(dMMR)患者根治性胃切除术后无进展生存期(PFS)的有效性。
方法
建立机器学习模型和列线图,以预测接受根治性胃切除术的非转移性dMMR胃癌患者的PFS。使用Cox回归分析确定独立危险因素,以建立列线图。通过C指数、时间接收者操作特征(T-ROC)曲线、校准曲线和决策曲线分析(DCA)曲线评估模型的性能。随后,根据列线图的风险评分将患者分为高风险和低风险组。
结果
在研究的582例患者中,机器学习模型的C指数值高于列线图。随机生存森林(RSF)的C指数最高(0.968),其次是极端梯度提升(XGboosting,0.945)、决策生存树(DST,0.924)、列线图(0.808)和第八版TNM分期(0.757)。所有模型均显示出良好的校准,综合Brier评分较低(<0.1),尽管随着时间的推移存在校准漂移,特别是在传统列线图模型中。DCA显示,与目前实践中使用的传统模型相比,所有机器学习模型的净效益均有所增加。年龄、阳性淋巴结、神经侵犯和Ki67被确定为关键因素,并纳入预后列线图。
结论
我们的研究证明了RSF算法在准确预测dMMR胃癌患者胃切除术后无进展生存期(PFS)方面的有效性。由该算法创建的列线图已被证明是识别高危患者的有价值工具,为临床医生提供术后监测和个性化治疗策略的重要信息。