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大规模听力表型分析确定了与听力损失亚型相关的不同基因和通路。

Large-scale audiometric phenotyping identifies distinct genes and pathways involved in hearing loss subtypes.

作者信息

Ahmed Samah, Vaden Kenneth I, Leitao Darren, Dubno Judy R, Drögemöller Britt I

机构信息

Department of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, Manitoba, Canada.

Hearing Research Program, Department of Otolaryngology-Head and Neck Surgery, Medical University of South Carolina, South Carolina, Charleston, USA.

出版信息

medRxiv. 2025 Jan 15:2025.01.14.24318673. doi: 10.1101/2025.01.14.24318673.

DOI:10.1101/2025.01.14.24318673
PMID:39867375
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11759831/
Abstract

Age-related hearing loss affects one-third of the population over 65 years. However, the diverse pathologies underlying these heterogenous phenotypes complicate genetic studies. To overcome challenges associated with accurate phenotyping for older adults with hearing loss, we applied computational phenotyping approaches based on audiometrically measured hearing loss. This novel phenotyping strategy uncovered distinct genetic variants associated with sensory and metabolic hearing loss. Sex-stratified analyses of these sexually dimorphic hearing loss phenotypes revealed a novel locus of relevance to sensory hearing loss in males, but not females. Enrichment analyses revealed that genes involved in frontotemporal dementia were implicated in metabolic hearing loss, while genes relating to sensory processing of sound by hair cells were implicated in sensory hearing loss. Our study has enhanced our understanding of these two distinct hearing loss phenotypes, representing the first step in the development of more precise treatments for these pathologically distinct hearing loss phenotypes.

摘要

年龄相关性听力损失影响着三分之一的65岁以上人群。然而,这些异质表型背后的多种病理情况使基因研究变得复杂。为了克服与听力损失老年成人准确表型分析相关的挑战,我们应用了基于听力测量的听力损失的计算表型分析方法。这种新颖的表型分析策略发现了与感觉性和代谢性听力损失相关的不同基因变异。对这些性别二态性听力损失表型的性别分层分析揭示了一个与男性感觉性听力损失相关的新位点,而女性则没有。富集分析表明,与额颞叶痴呆相关的基因与代谢性听力损失有关,而与毛细胞声音感觉处理相关的基因与感觉性听力损失有关。我们的研究增进了我们对这两种不同听力损失表型的理解,代表了为这些病理上不同的听力损失表型开发更精确治疗方法的第一步。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd0c/11759831/3acf41b264b1/nihpp-2025.01.14.24318673v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd0c/11759831/146cf109933d/nihpp-2025.01.14.24318673v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd0c/11759831/82ab20adb6af/nihpp-2025.01.14.24318673v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd0c/11759831/3acf41b264b1/nihpp-2025.01.14.24318673v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd0c/11759831/146cf109933d/nihpp-2025.01.14.24318673v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd0c/11759831/82ab20adb6af/nihpp-2025.01.14.24318673v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd0c/11759831/3acf41b264b1/nihpp-2025.01.14.24318673v1-f0003.jpg

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本文引用的文献

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Potentially Modifiable Dementia Risk Factors in Canada: An Analysis of Canadian Longitudinal Study on Aging with a Multi-Country Comparison.加拿大潜在可改变的痴呆风险因素:基于加拿大老龄化纵向研究的分析及多国比较
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Genetic associations with dementia-related proteinopathy: Application of item response theory.
与痴呆相关蛋白病的遗传关联:项目反应理论的应用。
Alzheimers Dement. 2024 Apr;20(4):2906-2921. doi: 10.1002/alz.13741. Epub 2024 Mar 9.
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Development of a human genetics-guided priority score for 19,365 genes and 399 drug indications.开发一种基于人类遗传学的优先级评分系统,用于评估 19365 个基因和 399 种药物适应证。
Nat Genet. 2024 Jan;56(1):51-59. doi: 10.1038/s41588-023-01609-2. Epub 2024 Jan 3.
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Improving fine-mapping by modeling infinitesimal effects.通过模拟微小效应来改进精细映射。
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Accurate phenotypic classification and exome sequencing allow identification of novel genes and variants associated with adult-onset hearing loss.准确的表型分类和外显子组测序可鉴定与成人发病听力损失相关的新基因和变异。
PLoS Genet. 2023 Nov 27;19(11):e1011058. doi: 10.1371/journal.pgen.1011058. eCollection 2023 Nov.
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Sex differences in the polygenic architecture of hearing problems in adults.成人听力问题的多基因结构中的性别差异。
Genome Med. 2023 May 11;15(1):36. doi: 10.1186/s13073-023-01186-3.
8
Associations Between Cardiovascular Risk Factors and Audiometric Hearing: Findings From the Canadian Longitudinal Study on Aging.心血管危险因素与听力的关系:来自加拿大老龄化纵向研究的发现。
Ear Hear. 2023;44(6):1332-1343. doi: 10.1097/AUD.0000000000001370. Epub 2023 May 1.
9
The genetic contribution of the X chromosome in age-related hearing loss.X染色体在年龄相关性听力损失中的遗传作用。
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10
Genome-wide association meta-analysis identifies 48 risk variants and highlights the role of the stria vascularis in hearing loss.全基因组关联荟萃分析确定了 48 个风险变异,并强调了血管纹在听力损失中的作用。
Am J Hum Genet. 2022 Jun 2;109(6):1077-1091. doi: 10.1016/j.ajhg.2022.04.010. Epub 2022 May 16.