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ping Perturb-Atlas(不太明确“ping”在这里的确切含义,可能是特定软件、工具或流程中的一个操作指令,暂按字面翻译为“ping”)。

ping the Perturb-Atlas.

作者信息

Sun Yiwen, Lin Wenyang, Kaundal Ravinder, Chi Tian

机构信息

Gene Editing Center, School of Life Sciences and Technology, ShanghaiTech University, Shanghai 201210, China.

Department of Immunobiology, Yale University School of Medicine, New Haven, CT 06520, USA.

出版信息

Life Med. 2022 Nov 30;2(1):lnac057. doi: 10.1093/lifemedi/lnac057. eCollection 2023 Feb.

Abstract

A key objective of the research in the postgenomic era is to decipher the functions of the mammalian genome, which has remained largely enigmatic despite intensive efforts in the functional genomics field over the past two decades. To attack this problem, we have combined the CRISPR-Cas and Cre-Lox technologies to develop iMAP (inducible Mosaic Animal for Perturbation), a transformative tool for rapidly unraveling mammalian genome function . Furthermore, we have used iMAP to rapidly construct a "Perturb-Atlas" profiling the functions of 90 protein-coding genes across 39 tissues in mice, which has offered rich insights into gene functions difficult to readily obtain using conventional mouse gene-targeting models. In this research highlight, we offer a brief primer on the iMAP technology, outlining its mechanism, strengths and limitations, and pointing out future directions of research in the area.

摘要

后基因组时代研究的一个关键目标是破译哺乳动物基因组的功能,尽管在过去二十年里功能基因组学领域付出了巨大努力,但该基因组在很大程度上仍不为人知。为了解决这个问题,我们将CRISPR-Cas和Cre-Lox技术相结合,开发了iMAP(诱导性嵌合扰动动物),这是一种用于快速揭示哺乳动物基因组功能的变革性工具。此外,我们利用iMAP快速构建了一个“扰动图谱”,描绘了小鼠39个组织中90个蛋白质编码基因的功能,这为使用传统小鼠基因靶向模型难以轻易获得的基因功能提供了丰富的见解。在本研究亮点中,我们简要介绍了iMAP技术,概述了其机制、优点和局限性,并指出了该领域未来的研究方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b7e/11749751/1e7b889b5aa3/lnac057_fig1.jpg

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