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巴基斯坦开伯尔-普赫图赫瓦省哈里普尔县当地人口中蚊媒疾病遗传风险预测的综合方法。

An integrated approach to predict genetic risk for Mosquito-Borne diseases in the local Population of Tehsil Haripur, Khyber Pakhtunkhwa, Pakistan.

作者信息

Basri Rabea, Aqeel Muslim Bin, Awan Faryal Mehwish, Khan Sadiq Noor, Obaid Ayesha, Parveen Rubina, Mohsin Muhammad, Akhtar Wajeeha, Shah Abdal Hussain, Afghan Tahira Sher, Alam Amir, Khan Saira, Naz Anam

机构信息

Department of Medical Lab Technology, The University of Haripur (UOH), Haripur, Khyber Pakhtunkhwa, Pakistan.

Department of Microbiology, Faculty of Science and Technology, University of Central Punjab, Lahore, Pakistan.

出版信息

Sci Rep. 2025 Jan 28;15(1):3478. doi: 10.1038/s41598-025-88095-0.

Abstract

Highly variable response shown by individuals against mosquito-borne infections suggests that host genetic factors play an important role in determining mosquito-borne disease onset. Therefore, it is necessary to determine the genetic risk of these diseases in specific populations. The current study aimed to determine the percentage of individuals in the general population carrying mosquito-borne disease susceptibility and protection-related variants. This study initially aggregated mosquito-borne disease susceptibility and protection-related variants from all publically available data and literature. Afterward, the allele frequency was calculated 1009 genetic variants of 366 genes associated with susceptibility and protection to estimate the global prevalence in multiple ethnicities (Middle Eastern, Ashkenazi Jewish, European (Non-Finnish), Latino/Admixed American, South Asian, East Asian, European (Finnish), North Asian, Southeast Asian, African American, and Swedish population). Furthermore, the cumulative allele frequency of all susceptibility and protection-related variants was calculated in diverse ethnic groups and the relationship with mosquito-borne disease-associated morbidity and mortality was examined to determine whether results are consistent with founder effect in these populations. Two prioritized genetic variants of IL-10 (rs1800871) and FcγRIIA (rs1801274) were examined in the Tehsil Haripur population to assess the genetic risks linked to susceptibility and protection against mosquito-borne diseases. The findings of this study revealed overlapping genes most implicated in mosquito-borne disease linked with susceptibility and protection across different ethnic ancestries. In the available sample size, the percentage of TC and TT genotypes in IL-10 genetic variant (rs1800871) was 12% and 88%, respectively and GA and GG genotypes in FcγRIIA(rs1801274) genetic variant were 6% and 94% respectively. Based on statistical analysis, the percentage allele frequency of IL-10 (rs1800871) variant was 0.2112% and the FcγRIIA (rs1801274) variant is 0.1128% in the current study. Additionally, this study reflects that screening of genetic variants associated with susceptibility and protection in a population gives better insights into organizing public health awareness campaigns to control diseases.

摘要

个体对蚊媒感染表现出的高度可变反应表明,宿主遗传因素在决定蚊媒疾病发病方面起着重要作用。因此,有必要确定特定人群中这些疾病的遗传风险。当前的研究旨在确定普通人群中携带蚊媒疾病易感性和保护性相关变异的个体比例。本研究首先从所有公开可用的数据和文献中汇总蚊媒疾病易感性和保护性相关变异。之后,计算了与易感性和保护性相关的366个基因的1009个遗传变异的等位基因频率,以估计多个种族(中东、阿什肯纳兹犹太、欧洲(非芬兰)、拉丁裔/混血美国人、南亚、东亚、欧洲(芬兰)、北亚、东南亚、非裔美国人和瑞典人群)中的全球流行率。此外,计算了不同种族群体中所有易感性和保护性相关变异的累积等位基因频率,并检查了其与蚊媒疾病相关发病率和死亡率的关系,以确定结果是否与这些人群中的奠基者效应一致。在哈里普尔乡人群中检测了白细胞介素 - 10(rs1800871)和FcγRIIA(rs1801274)的两个优先遗传变异,以评估与蚊媒疾病易感性和保护性相关的遗传风险。本研究结果揭示了在不同种族祖先中,与蚊媒疾病易感性和保护性相关的重叠基因最为密切。在现有样本量中,白细胞介素 - 10基因变异(rs1800871)中TC和TT基因型的比例分别为12%和88%,FcγRIIA(rs1801274)基因变异中GA和GG基因型的比例分别为6%和94%。基于统计分析,本研究中白细胞介素 - 10(rs1800871)变异的等位基因频率百分比为0.2112%,FcγRIIA(rs1801274)变异为0.1128%。此外,本研究表明,在人群中筛查与易感性和保护性相关的遗传变异,有助于更好地组织公共卫生意识活动以控制疾病。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce35/11775262/51e97b08efae/41598_2025_88095_Fig6_HTML.jpg

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