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参与sp. 菌株CHM43中2-酮葡萄糖酸盐同化作用的两种依赖于NADPH的2-酮葡萄糖酸盐还原酶。

Two NADPH-dependent 2-ketogluconate reductases involved in 2-ketogluconate assimilation in sp. strain CHM43.

作者信息

Nakashima Sakura, Matsutani Minenosuke, Kataoka Naoya, Adachi Osao, Yamashita Riku, Matsushita Kazunobu, Tippayasak Uraiwan, Theeragool Gunjana, Yakushi Toshiharu

机构信息

Joint Degree Program of Kasetsart University and Yamaguchi University, Graduate School of Science and Technology for Innovation, Yamaguchi University, Yamaguchi, Japan.

Department of Food, Aroma and Cosmetic Chemistry, Faculty of Bioindustry, Tokyo University of Agriculture, Hokkaido, Japan.

出版信息

Appl Environ Microbiol. 2025 Feb 19;91(2):e0250124. doi: 10.1128/aem.02501-24. Epub 2025 Jan 29.

Abstract

UNLABELLED

Incomplete oxidation of glucose by sp. strain CHM43 produces gluconic acid and then 2- or 5-ketogluconic acid. Although 2-keto-D-gluconate (2KG) is a valuable compound, it is sometimes consumed by itself via an unknown metabolic pathway. We anticipated that 2KG reductase (2KGR) would be a key enzyme in 2KG metabolism. and were identified in the genome of strain CHM43, which encode proteins with 70% and 48% amino acid sequence identity, respectively, to the 2KGR of strain 621H. Constructed mutant derivatives of strain CHM43 lacking , , or both were examined for their 2KG consumption ability. Strains ∆ and ∆ consumed 2KG like the parental strain. However, the double-deletion (∆∆) strain did not consume 2KG at all, although it produced 2KG like the parental strain. Strains ∆ and ∆ each showed decreased 2KGR activity compared with the parental strain, and strain ΔΔ lost 2KGR activity. These results suggest that reduction of 2KG catalyzed by GLF_0478 and GLF_1777 is the committed step in 2KG metabolism in sp. strain CHM43. The two 2KGRs showed high activity at neutral pH and lower values for NADPH than NADH. Results of induction experiments suggest that GLF_0478 is constitutively expressed at a low level but induced by 2KG, and GLF_1777 is also inducible by 2KG but repressed in the absence of an inducer. Our study that characterizes the key genes for 2KG consumption in gives insights for improvement of biological 2KG production systems.

IMPORTANCE

2-Keto-D-gluconate (2KG), a product of incomplete oxidation of glucose by acetic acid bacteria including spp., is used for various purposes, including in the food industry. also consumes 2KG via an unclear metabolic pathway. It is reported that spp. and phosphorylate 2KG in the first step of 2KG metabolism, but some enteric bacteria including reduce 2KG. This study evaluated the 2KG consumption ability of a mutant derivative of a strain of that lacks two putative 2KGR-encoding genes. The mutant strain did not consume 2KG at all; the two 2KGRs were each found to catalyze 2KG reduction. It is concluded that reduction of 2KG is the committed step in 2KG metabolism in . The results presented here give insights that might facilitate improvement of 2KG production systems that use .

摘要

未标记

醋酸杆菌属CHM43菌株对葡萄糖的不完全氧化产生葡萄糖酸,然后生成2 - 酮基葡萄糖酸或5 - 酮基葡萄糖酸。虽然2 - 酮基 - D - 葡萄糖酸(2KG)是一种有价值的化合物,但它有时会通过未知的代谢途径自身被消耗。我们预计2KG还原酶(2KGR)是2KG代谢中的关键酶。在CHM43菌株的基因组中鉴定出了 和 ,它们编码的蛋白质与621H菌株的2KGR氨基酸序列同一性分别为70%和48%。构建了缺失 、 或两者的CHM43菌株突变衍生物,并检测它们对2KG的消耗能力。∆ 和∆ 菌株消耗2KG的情况与亲本菌株相似。然而,双缺失(∆∆)菌株虽然像亲本菌株一样产生2KG,但根本不消耗2KG。与亲本菌株相比,∆ 和∆ 菌株的2KGR活性均降低,而∆∆ 菌株失去了2KGR活性。这些结果表明,由GLF_0478和GLF_1777催化的2KG还原是醋酸杆菌属CHM43菌株中2KG代谢的关键步骤。这两种2KGR在中性pH下表现出高活性,对NADPH的 值低于对NADH的 值。诱导实验结果表明,GLF_0478在低水平下组成性表达,但可被2KG诱导,GLF_1777也可被2KG诱导,但在没有诱导剂时受到抑制。我们对醋酸杆菌属中2KG消耗关键基因的表征研究为改进生物2KG生产系统提供了见解。

重要性

2 - 酮基 - D - 葡萄糖酸(2KG)是包括醋酸杆菌属在内的醋酸菌对葡萄糖不完全氧化的产物,用于包括食品工业在内的各种用途。醋酸杆菌属也通过不清楚的代谢途径消耗2KG。据报道,醋酸杆菌属和在2KG代谢的第一步将2KG磷酸化,但包括大肠杆菌在内的一些肠道细菌会还原2KG。本研究评估了一株缺失两个假定的2KGR编码基因的醋酸杆菌属菌株突变衍生物对2KG的消耗能力。该突变菌株根本不消耗2KG;发现这两种2KGR均催化2KG还原。得出结论,2KG还原是醋酸杆菌属中2KG代谢的关键步骤。此处呈现的结果为改进使用醋酸杆菌属的2KG生产系统提供了可能有用的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1571/11837542/4618cc88ce56/aem.02501-24.f001.jpg

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