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通过结合加权基因共表达网络分析(WGCNA)和机器学习算法鉴定泛素结合酶E2N(UBE2N)作为阿尔茨海默病的生物标志物。

Identification of UBE2N as a biomarker of Alzheimer's disease by combining WGCNA with machine learning algorithms.

作者信息

Feng Gangyi, Zhong Manli, Huang Hudie, Zhao Pu, Zhang Xiaoyu, Wang Tao, Gao Huiling, Xu He

机构信息

Key Laboratory of Bioresource Research and Development of Liaoning Province, College of Life and Health Sciences, Northeastern University, Shenyang, China.

Department of Anatomy, Histology and Embryology, School of Medicine, Shenzhen University, Shenzhen, China.

出版信息

Sci Rep. 2025 Feb 22;15(1):6479. doi: 10.1038/s41598-025-90578-z.

Abstract

Alzheimer's disease (AD) is the most common cause of dementia, emphasizing the critical need for the development of biomarkers that facilitate accurate and objective assessment of disease progression for early detection and intervention to delay its onset. In our study, three AD datasets from the Gene Expression Omnibus (GEO) database were integrated for differential expression analysis, followed by a weighted gene co-expression network analysis (WGCNA), and potential AD biomarkers were screened. Our study identified UBE2N as a promising biomarker for AD. Functional enrichment analysis revealed that UBE2N is associated with synaptic vesicle cycling and T cell/B cell receptor signaling pathways. Notably, UBE2N expression levels were found to be significantly reduced in the cortex and hippocampus of the Tau mice. Furthermore, analysis of single-cell data from AD patients demonstrated the association of UBE2N and T cell function. These findings underscore the potential of UBE2N as a valuable biomarker for AD, offering important insights for diagnosis and targeted therapeutic strategies.

摘要

阿尔茨海默病(AD)是痴呆最常见的病因,这凸显了开发生物标志物的迫切需求,这些生物标志物有助于对疾病进展进行准确客观的评估,以便早期检测和干预,延缓其发病。在我们的研究中,整合了来自基因表达综合数据库(GEO)的三个AD数据集进行差异表达分析,随后进行加权基因共表达网络分析(WGCNA),并筛选潜在的AD生物标志物。我们的研究确定UBE2N是一种有前景的AD生物标志物。功能富集分析表明,UBE2N与突触小泡循环以及T细胞/B细胞受体信号通路相关。值得注意的是,在Tau小鼠的皮质和海马中发现UBE2N表达水平显著降低。此外,对AD患者单细胞数据的分析证明了UBE2N与T细胞功能的关联。这些发现强调了UBE2N作为AD有价值生物标志物的潜力,为诊断和靶向治疗策略提供了重要见解。

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