Pettinato Eugenio, Steiner Thomas M, Cassens Eric A, Geisberger Thomas, Seitz Christian, König Simone, Eisenreich Wolfgang, Berg Ivan A
Institute for Molecular Microbiology and Biotechnology, University of Münster, Münster, Germany.
Bavarian NMR Center-Structural Membrane Biochemistry, Department of Chemistry, Technische Universität München, Garching, Germany.
Front Microbiol. 2025 Feb 12;16:1545849. doi: 10.3389/fmicb.2025.1545849. eCollection 2025.
is a strictly anaerobic sulfur-reducing deltaproteobacterium that can grow heterotrophically by oxidation of acetate or autotrophically with molecular hydrogen. Here we show that possesses a putative operon encoding enzymes of the methylcitrate cycle of propionate oxidation and demonstrate that this bacterium is capable of propionate growth. However, activities of the methylcitrate cycle enzymes could not be detected in extracts of propionate-grown cells, and experiments with [U-C]propionate and comparative proteomic analysis of acetate- and propionate-grown cells suggested that the methylcitrate cycle is not active during propionate growth. Instead, propionyl-CoA assimilation proceeds via its carboxylation to methylmalonyl-CoA, which is further converted to succinyl-CoA. The latter is directed to the tricarboxylic acid (TCA) cycle, where it is converted to oxaloacetate and condenses with acetyl-CoA (produced by decarboxylation of another oxaloacetate molecule) to form citrate, which is oxidized in the TCA cycle. These results highlight the uncertainty of genomic predictions in the analysis of microbial metabolic pathways and the need for their experimental confirmation.
是一种严格厌氧的硫还原δ-变形菌,可通过乙酸氧化进行异养生长,或利用分子氢进行自养生长。在这里,我们表明其拥有一个假定的操纵子,编码丙酸氧化甲基柠檬酸循环的酶,并证明该细菌能够利用丙酸生长。然而,在以丙酸生长的细胞提取物中未检测到甲基柠檬酸循环酶的活性,用[U-C]丙酸进行的实验以及对以乙酸和丙酸生长的细胞的比较蛋白质组学分析表明,在丙酸生长过程中甲基柠檬酸循环不活跃。相反,丙酰辅酶A通过羧化作用转化为甲基丙二酰辅酶A进行同化,后者进一步转化为琥珀酰辅酶A。后者进入三羧酸(TCA)循环,在那里它转化为草酰乙酸,并与乙酰辅酶A(由另一个草酰乙酸分子脱羧产生)缩合形成柠檬酸,柠檬酸在TCA循环中被氧化。这些结果突出了微生物代谢途径分析中基因组预测的不确定性以及对其实验验证的必要性。