Tracy Matt, Sosa Alfaro Victor, Campeciño Julius, Hird Krystina, Hegg Eric L, Lehnert Nicolai, Elliott Sean J
Department of Chemistry, Boston University, 24 Cummington Mall, Boston, Massachusetts 02215, United States.
Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.
Biochemistry. 2025 Mar 18;64(6):1359-1369. doi: 10.1021/acs.biochem.4c00761. Epub 2025 Mar 3.
Cytochrome nitrite reductase (NrfA) is a pentaheme enzyme capable of the six-electron reduction of nitrite to ammonia, which is a key step in the nitrogen cycle. All NrfA enzymes appear to have a branched set of two heme-based pathways for electron transfer to a conserved active site, and until recently, NrfA enzymes from a variety of microorganisms were considered to possess a homodimeric structure; yet, recent efforts have shown that in solution, purified () NrfA is a monomer. Direct protein electrochemistry has been used in the past to characterize the dimeric NrfAs from and , revealing features of maximal activity as a function of nitrite concentration, and redox poise, both of which were interpreted in terms of the dimeric structure providing multiple redox equivalents. Here, we examine NrfA using protein film electrochemistry and find that all of the features that were associated with the dimeric enzymes are also found in the monomeric enzyme. Further, we probe the contribution of specific heme environments through investigation of two His to Met heme ligand mutants, each along a different branch of the electron transfer network, which demonstrates that each path is likely essential to support native-like catalysis.
细胞色素亚硝酸盐还原酶(NrfA)是一种含五个血红素的酶,能够将亚硝酸盐六电子还原为氨,这是氮循环中的关键步骤。所有NrfA酶似乎都有一组基于血红素的分支电子传递途径,通向一个保守的活性位点,直到最近,来自多种微生物的NrfA酶都被认为具有同二聚体结构;然而,最近的研究表明,在溶液中,纯化的()NrfA是单体。过去曾使用直接蛋白质电化学来表征来自和的二聚体NrfA,揭示了最大活性与亚硝酸盐浓度和氧化还原平衡的关系,这两者都根据提供多个氧化还原当量的二聚体结构进行了解释。在这里,我们使用蛋白质膜电化学研究NrfA,发现单体酶中也存在与二聚体酶相关的所有特征。此外,我们通过研究两个组氨酸到甲硫氨酸血红素配体突变体来探究特定血红素环境的贡献,每个突变体沿着电子传递网络的不同分支,这表明每条途径可能对于支持类似天然的催化作用都是必不可少的。