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希瓦氏菌细胞色素 c 亚硝酸盐还原酶的直接电化学:在二聚体界面上相互作用的证据。

Direct electrochemistry of Shewanella oneidensis cytochrome c nitrite reductase: evidence of interactions across the dimeric interface.

机构信息

Department of Chemistry, Boston University, 590 Commonwealth Avenue, Boston, MA 02215, USA.

出版信息

Biochemistry. 2012 Dec 21;51(51):10175-85. doi: 10.1021/bi3011708. Epub 2012 Dec 12.

Abstract

Shewanella oneidensis cytochrome c nitrite reductase (soNrfA), a dimeric enzyme that houses five c-type hemes per protomer, conducts the six-electron reduction of nitrite and the two-electron reduction of hydroxylamine. Protein film voltammetry (PFV) has been used to study the cytochrome c nitrite reductase from Escherichia coli (ecNrfA) previously, revealing catalytic reduction of both nitrite and hydroxylamine substrates by ecNrfA adsorbed to a graphite electrode that is characterized by "boosts" and attenuations in activity depending on the applied potential. Here, we use PFV to investigate the catalytic properties of soNrfA during both nitrite and hydroxylamine turnover and compare those properties to the properties of ecNrfA. Distinct differences in both the electrochemical and kinetic characteristics of soNrfA are observed; e.g., all detected electron transfer steps are one-electron in nature, contrary to what has been observed in ecNrfA [Angove, H. C., Cole, J. A., Richardson, D. J., and Butt, J. N. (2002) J. Biol. Chem. 277, 23374-23381]. Additionally, we find evidence of substrate inhibition during nitrite turnover and negative cooperativity during hydroxylamine turnover, neither of which has previously been observed in any cytochrome c nitrite reductase. Collectively, these data provide evidence that during catalysis, potential pathways of communication exist between the individual soNrfA monomers comprising the native homodimer.

摘要

希瓦氏菌细胞色素 c 亚硝酸盐还原酶(soNrfA)是一种二聚体酶,每个亚基含有五个 c 型血红素,能够进行亚硝酸盐的六电子还原和羟胺的两电子还原。先前已经使用蛋白膜伏安法(PFV)研究了大肠杆菌(ecNrfA)的细胞色素 c 亚硝酸盐还原酶,揭示了 ecNrfA 吸附到石墨电极上对亚硝酸盐和羟胺底物的催化还原,其特征是根据施加的电势,活性会出现“增强”和“衰减”。在这里,我们使用 PFV 研究了 soNrfA 在亚硝酸盐和羟胺周转过程中的催化特性,并将这些特性与 ecNrfA 的特性进行了比较。观察到 soNrfA 在电化学和动力学特性上都存在明显差异;例如,所有检测到的电子转移步骤都是单电子性质的,与在 ecNrfA 中观察到的情况相反[Angove,H.C.,Cole,J.A.,Richardson,D.J.,和 Butt,J.N.(2002)J. Biol. Chem. 277,23374-23381]。此外,我们发现亚硝酸盐周转过程中存在底物抑制,羟胺周转过程中存在负协同作用,这在以前的任何细胞色素 c 亚硝酸盐还原酶中都没有观察到。总的来说,这些数据表明,在催化过程中,组成天然同源二聚体的单个 soNrfA 单体之间存在潜在的通讯途径。

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