Lin Yi-Hsuan, Kim Tae Hun, Das Suman, Pal Tanmoy, Wessén Jonas, Rangadurai Atul Kaushik, Kay Lewis E, Forman-Kay Julie D, Chan Hue Sun
Department of Biochemistry, University of Toronto, Toronto, Canada.
Molecular Medicine, Hospital for Sick Children, Toronto, Canada.
Elife. 2025 Mar 3;13:RP100284. doi: 10.7554/eLife.100284.
Liquid-liquid phase separation (LLPS) involving intrinsically disordered protein regions (IDRs) is a major physical mechanism for biological membraneless compartmentalization. The multifaceted electrostatic effects in these biomolecular condensates are exemplified here by experimental and theoretical investigations of the different salt- and ATP-dependent LLPSs of an IDR of messenger RNA-regulating protein Caprin1 and its phosphorylated variant pY-Caprin1, exhibiting, for example, reentrant behaviors in some instances but not others. Experimental data are rationalized by physical modeling using analytical theory, molecular dynamics, and polymer field-theoretic simulations, indicating that interchain ion bridges enhance LLPS of polyelectrolytes such as Caprin1 and the high valency of ATP-magnesium is a significant factor for its colocalization with the condensed phases, as similar trends are observed for other IDRs. The electrostatic nature of these features complements ATP's involvement in π-related interactions and as an amphiphilic hydrotrope, underscoring a general role of biomolecular condensates in modulating ion concentrations and its functional ramifications.
涉及内在无序蛋白区域(IDR)的液-液相分离(LLPS)是生物无膜区室化的主要物理机制。本文通过对信使RNA调节蛋白Caprin1的一个IDR及其磷酸化变体pY-Caprin1不同的盐依赖性和ATP依赖性LLPS进行实验和理论研究,例证了这些生物分子凝聚物中多方面的静电效应,例如,在某些情况下表现出折返行为,而在其他情况下则不然。通过使用分析理论、分子动力学和聚合物场论模拟的物理模型对实验数据进行了合理化分析,结果表明链间离子桥增强了Caprin1等聚电解质的LLPS,并且ATP-镁的高价态是其与凝聚相共定位的重要因素,因为在其他IDR中也观察到类似趋势。这些特性的静电性质补充了ATP在π相关相互作用中的作用以及作为两亲性水溶助长剂的作用,强调了生物分子凝聚物在调节离子浓度及其功能影响方面的普遍作用。