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表面静电决定 RNA 结合蛋白 CAPRIN1 凝聚物的浓度和流体动力学性质。

Surface electrostatics dictate RNA-binding protein CAPRIN1 condensate concentration and hydrodynamic properties.

机构信息

Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada; Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada; Department of Chemistry, University of Toronto, Toronto, Ontario, Canada.

Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada; Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada; Department of Chemistry, University of Toronto, Toronto, Ontario, Canada; Hospital for Sick Children, Program in Molecular Medicine, Toronto, Ontario, Canada.

出版信息

J Biol Chem. 2023 Jan;299(1):102776. doi: 10.1016/j.jbc.2022.102776. Epub 2022 Dec 7.

Abstract

Biomolecular condensates concentrate proteins, nucleic acids, and small molecules and play an essential role in many biological processes. Their formation is tuned by a balance between energetically favorable and unfavorable contacts, with charge-charge interactions playing a central role in some systems. The positively charged intrinsically disordered carboxy-terminal region of the RNA-binding protein CAPRIN1 is one such example, phase separating upon addition of negatively charged ATP or high concentrations of sodium chloride (NaCl). Using solution NMR spectroscopy, we measured residue-specific near-surface electrostatic potentials (ϕ) of CAPRIN1 along its NaCl-induced phase separation trajectory to compare with those obtained using ATP. In both cases, electrostatic shielding decreases ϕ values, yet surface potentials of CAPRIN1 in the two condensates can be different, depending on the amount of NaCl or ATP added. Our results establish that even small differences in ϕ can significantly affect the level of protein enrichment and the mechanical properties of the condensed phase, leading, potentially, to the regulation of biological processes.

摘要

生物分子凝聚物浓缩蛋白质、核酸和小分子,并在许多生物过程中发挥着重要作用。它们的形成是通过有利和不利接触之间的平衡来调节的,其中电荷-电荷相互作用在某些系统中起着核心作用。RNA 结合蛋白 CAPRIN1 的带正电荷的固有无序羧基末端区域就是这样一个例子,在添加带负电荷的 ATP 或高浓度氯化钠 (NaCl) 时会发生相分离。使用溶液 NMR 光谱法,我们沿着 CAPRIN1 的 NaCl 诱导的相分离轨迹测量了其残基特异性近表面静电势 (ϕ),并将其与使用 ATP 获得的结果进行了比较。在这两种情况下,静电屏蔽都会降低 ϕ 值,但由于添加的 NaCl 或 ATP 量不同,两种凝聚物中 CAPRIN1 的表面电势可能不同。我们的结果表明,即使 ϕ 值存在微小差异,也会显著影响蛋白质浓缩的水平和凝聚相的力学性质,从而可能调节生物过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd42/9823214/88c457581f09/gr1.jpg

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