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一种多维方法揭示了乳酰化相关基因在骨关节炎中的功能。

A multidimensional approach reveals the function of lactylation related genes in osteoarthritis.

作者信息

Luan Shanjie, Luan Jian

机构信息

School of Basic Medical Sciences, Shandong University, 44 Wenhua Xi Road, Jinan, 250012, Shandong, China.

Department of Spine Surgery, Qingdao Municipal Hospital, No. 5, Middle Dong Hai Road, Qingdao, 266000, Shandong, China.

出版信息

Sci Rep. 2025 Mar 5;15(1):7743. doi: 10.1038/s41598-025-89072-3.


DOI:10.1038/s41598-025-89072-3
PMID:40044764
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11882932/
Abstract

As a complex joint disease, osteoarthritis (OA) increasingly affects the elderly. Currently, existing drugs cannot cure OA. There is an urgent need for new targets. Lactylation is closely related to inflammation and is an emerging target in treatment. However, the potential of lactylation-related genes (LRGs) in OA is poorly understood. This study identified differentially expressed lactylation-related genes (DELRGs) through bioinformatics analysis, constructed a model through a combination of various machine learning methods, and performed immune infiltration analysis, single-cell analysis and molecular docking to predict drugs. Mendelian randomization was used to study the causal relationships between eQTLs and the three types of osteoarthritis. Finally, we used RT-qPCR and CCK-8 assays to validate the results of the bioinformatics analysis. We generated a model with good diagnostic efficacy and seven hub genes, which revealed that osteoarthritis is associated with the infiltration of immune cells such as dendritic cells and macrophages, as well as with the cell communication between fibroblasts and macrophages. Azacitidine, with significant docking results, was obtained through seven hub genes. The results of RT-qPCR verified the expression of LRGs and CCK-8 assay indicated that azacitidine can significantly inhibit the proliferation of OA cells. Overall, we established a lactylation-based diagnostic model and obtained novel biomarkers, which are expected to lead to the development of new strategies for the diagnosis and treatment of OA.

摘要

骨关节炎(OA)作为一种复杂的关节疾病,越来越多地影响老年人。目前,现有药物无法治愈OA。迫切需要新的治疗靶点。乳酸化与炎症密切相关,是一个新兴的治疗靶点。然而,乳酸化相关基因(LRGs)在OA中的潜力尚未得到充分了解。本研究通过生物信息学分析确定差异表达的乳酸化相关基因(DELRGs),结合多种机器学习方法构建模型,并进行免疫浸润分析、单细胞分析和分子对接以预测药物。采用孟德尔随机化研究eQTL与三种骨关节炎类型之间的因果关系。最后,我们使用RT-qPCR和CCK-8检测来验证生物信息学分析的结果。我们生成了一个具有良好诊断效能的模型和七个枢纽基因,揭示骨关节炎与树突状细胞和巨噬细胞等免疫细胞的浸润以及成纤维细胞与巨噬细胞之间的细胞通讯有关。通过七个枢纽基因获得了对接结果显著的阿扎胞苷。RT-qPCR结果验证了LRGs的表达,CCK-8检测表明阿扎胞苷可显著抑制OA细胞的增殖。总体而言,我们建立了基于乳酸化的诊断模型并获得了新的生物标志物,有望为OA的诊断和治疗开辟新策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/d8498ab0ca51/41598_2025_89072_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/8a8deac4798b/41598_2025_89072_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/8f6d5470acb3/41598_2025_89072_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/c9128f0d1e9e/41598_2025_89072_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/66ec11060256/41598_2025_89072_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/ecb06251ce12/41598_2025_89072_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/410e0601eac2/41598_2025_89072_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/d8498ab0ca51/41598_2025_89072_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/8a8deac4798b/41598_2025_89072_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/8f6d5470acb3/41598_2025_89072_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/c9128f0d1e9e/41598_2025_89072_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/66ec11060256/41598_2025_89072_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/ecb06251ce12/41598_2025_89072_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/410e0601eac2/41598_2025_89072_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82af/11882932/d8498ab0ca51/41598_2025_89072_Fig7_HTML.jpg

相似文献

[1]
A multidimensional approach reveals the function of lactylation related genes in osteoarthritis.

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[7]
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本文引用的文献

[1]
Beyond RNA-binding domains: determinants of protein-RNA binding.

RNA. 2024-11-18

[2]
Case report: VEXAS syndrome: an atypical indolent presentation as sacroiliitis with molecular response to azacitidine.

Front Immunol. 2024

[3]
Emerging roles of lactate in acute and chronic inflammation.

Cell Commun Signal. 2024-5-16

[4]
Lactylome analyses suggest systematic lysine-lactylated substrates in oral squamous cell carcinoma under normoxia and hypoxia.

Cell Signal. 2024-8

[5]
Glycolysis, a driving force of rheumatoid arthritis.

Int Immunopharmacol. 2024-5-10

[6]
Small-molecule targeting PKM2 provides a molecular basis of lactylation-dependent fibroblast-like synoviocytes proliferation inhibition against rheumatoid arthritis.

Eur J Pharmacol. 2024-6-5

[7]
Constructing lactylation-related genes prognostic model to effectively predict the disease-free survival and treatment responsiveness in prostate cancer based on machine learning.

Front Genet. 2024-3-19

[8]
Apoptotic body-inspired nanotherapeutics efficiently attenuate osteoarthritis by targeting BRD4-regulated synovial macrophage polarization.

Biomaterials. 2024-4

[9]
Targeting YAP1-regulated Glycolysis in Fibroblast-Like Synoviocytes Impairs Macrophage Infiltration to Ameliorate Diabetic Osteoarthritis Progression.

Adv Sci (Weinh). 2024-2

[10]
Identification of aging-related biomarkers and immune infiltration characteristics in osteoarthritis based on bioinformatics analysis and machine learning.

Front Immunol. 2023

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