Bellinazzo Francesca, Manders Irene, Heidemann Bas, Bolanos Manuel Aguirre, Stouten Evelien, Busscher Jacqueline, Abarca Dolores, van der Wal Froukje, Dornelas Marcelo Carnier, Angenent Gerco C, Proveniers Marcel, Nijveen Harm, Immink Richard G H
Laboratory of Molecular Biology, Cluster Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Bioscience, Wageningen Plant Research, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Biol Direct. 2025 Mar 10;20(1):29. doi: 10.1186/s13062-025-00625-y.
Tulipa gesneriana reproduces vegetatively by the development of bulb clusters from axillary meristems in the scales of a mother bulb. While part of the daughter bulbs in a cluster develop into large, flowering bulbs, others stay small and vegetative under the same environmental conditions. This study aims to investigate how these different developmental fates are orchestrated.
RNA-seq analysis revealed that the overall transcriptomic landscape of the two types of daughter bulbs does not differ substantially, but follows a similar trajectory over time. Nonetheless, the expression levels of genes related to proliferation already differ at early development stages. Surprisingly, at a later stage, transcriptomic changes related to flower induction are detectable in flowering as well as non-flowering bulbs, with some quantitative differences. However, genes linked with floral organ development are differentially expressed, as well as negative regulators of flowering and more basal metabolic processes. In search for the molecular determinants of daughter bulb size and developmental fate, we investigated members of the PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN (PEBP) gene family as candidates. Tulip FLOWERING LOCUS T1 (TgFT1), TgFT2, and TgFT3 are expressed in leaves and leaf-like organs of the mother plant, and their encoded proteins interact with the TCP transcription factor TEOSINTE BRANCHED1 (TgTB1). Therefore, we suggest that these three genes act as 'bulbigens', meaning regulators of axillary meristem outgrowth and hence, daughter bulb size. Furthermore, we found that TgFT2 and TgFT4 could constitute the main florigens in tulips, because of their expression pattern and the binding of their encoding proteins to the bZIP transcription factor FD (TgFD). Moreover, Arabidopsis lines ectopically expressing TgFT2 or TgFT4 flower significantly earlier than the wild type.
Differences in the developmental fate of tulip daughter bulbs are established early during development and are linked with differences in cell division and metabolism. The activity of members of the PEBP family, known for their role in flowering and storage organ formation in geophytes, appeared to be associated with the transcriptional switches observed during daughter bulb development. This points towards a functional role of these proteins in governing developmental trajectories underlying the mode of reproduction.
郁金香通过母鳞茎鳞片腋生分生组织发育形成鳞茎簇进行营养繁殖。在同一环境条件下,一个鳞茎簇中的部分子鳞茎发育成大型开花鳞茎,而其他子鳞茎则保持小型且继续营养生长。本研究旨在探究这些不同的发育命运是如何被调控的。
RNA测序分析表明,两种类型的子鳞茎的整体转录组图谱没有显著差异,但随着时间推移遵循相似的轨迹。然而,与增殖相关的基因在早期发育阶段表达水平就已不同。令人惊讶的是,在后期,与花诱导相关的转录组变化在开花和未开花的鳞茎中均可检测到,只是存在一些数量上的差异。然而,与花器官发育相关的基因、开花负调控因子以及更基础的代谢过程相关基因存在差异表达。为了寻找子鳞茎大小和发育命运的分子决定因素,我们研究了磷脂酰乙醇胺结合蛋白(PEBP)基因家族成员作为候选基因。郁金香开花位点T1(TgFT1)、TgFT2和TgFT3在母株的叶片和叶状器官中表达,其编码的蛋白质与TCP转录因子玉米分枝1(TgTB1)相互作用。因此,我们认为这三个基因作为“鳞茎发生基因”,即腋生分生组织生长的调节因子,从而决定子鳞茎的大小。此外,我们发现TgFT2和TgFT4可能构成郁金香的主要成花素,这是基于它们的表达模式以及其编码蛋白与bZIP转录因子FD(TgFD)的结合。此外,异位表达TgFT2或TgFT4的拟南芥品系比野生型开花明显更早。
郁金香子鳞茎发育命运的差异在发育早期就已确立,并且与细胞分裂和代谢的差异相关。PEBP家族成员的活性,已知其在地球植物开花和贮藏器官形成中发挥作用,似乎与子鳞茎发育过程中观察到的转录开关有关。这表明这些蛋白质在调控繁殖方式所依据的发育轨迹中具有功能性作用。