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在……中各种胁迫处理下s的全基因组鉴定与表达分析

Genome-wide identification and expression analysis of s under various stress treatment in .

作者信息

Li Guohui, Zhang Xingen, Li Yuyue, Zhang Xilu, Manzoor Muhammad Aamir, Sun Chuanbo, Song Cheng, Zhang Min

机构信息

Traditional Chinese Medicine Institute of Anhui Dabie Mountain, College of Biological and Pharmaceutical Engineering, West Anhui University, Lu'an, 237012 China.

Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.

出版信息

Physiol Mol Biol Plants. 2025 Feb;31(2):311-328. doi: 10.1007/s12298-025-01555-9. Epub 2025 Feb 27.

Abstract

UNLABELLED

The cytochrome P450 monooxygenases (CYP450) are the largest enzyme family in plant metabolism, playing a key role in the biosynthesis of both primary and secondary metabolites. However, the CYP450 has not yet been systematically characterized in Dendrobium species. In this study, 193 genes were identified in the genome of through bioinformatics, and divided into 2 groups and 10 clans. Chromosome localization results revealed that genes are distributed across 19 chromosomes. We identified eight common conserved motifs within the family of . Furthermore, prediction analysis of -acting elements in the promoter region indicated the presence of elements responsive to low temperature, drought, and hormones responsive elements in most genomes. Quantitative real-time PCR (qRT-PCR) analysis demonstrated the experiments expression patterns of genes in response to cold, drought treatment, and hormones, suggesting their involvement in abiotic stress responses and their role in Dendrobium growth. Overall, these results provide valuable insights into the functional dynamics of the genes and highlight potential candidates for further study of their biological roles.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s12298-025-01555-9.

摘要

未标注

细胞色素P450单加氧酶(CYP450)是植物代谢中最大的酶家族,在初级和次级代谢产物的生物合成中起关键作用。然而,CYP450在石斛属植物中尚未得到系统的表征。在本研究中,通过生物信息学在[石斛属植物名称]基因组中鉴定出193个基因,并将其分为2组和10个族。染色体定位结果表明,[基因名称]分布在19条染色体上。我们在[基因家族名称]家族中鉴定出八个常见的保守基序。此外,对启动子区域顺式作用元件的预测分析表明,在大多数[植物名称]基因组中存在对低温、干旱响应的元件以及激素响应元件。实时定量PCR(qRT-PCR)分析证明了[基因名称]基因在响应寒冷、干旱处理和激素时的表达模式,表明它们参与非生物胁迫响应以及在石斛生长中的作用。总体而言,这些结果为[基因名称]基因的功能动态提供了有价值的见解,并突出了进一步研究其生物学作用的潜在候选基因。

补充信息

在线版本包含可在10.1007/s12298-025-01555-9获取的补充材料。

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