Zhuo Jianwei, Zhang Jing, Xu Yinong, Ji Meng, Shen Haitao, Cui Gang
Neurosurgery & Brain and Nerve Research Laboratory, The First Affiliated Hospital of Soochow University, Suzhou, Jiangsu Province, China.
Department of Neurosurgery, Taizhou Fourth People's Hospital, Taizhou, Jiangsu Province, China.
Neurol Res. 2025 May;47(5):319-332. doi: 10.1080/01616412.2025.2476506. Epub 2025 Mar 13.
Immunotherapy has promise for glioblastoma multiforme (GBM) treatment and disulfidptosis, a form of cell death involving disintegration of the actin cytoskeleton, is a potential target. The aim of the current study was to identify genes associated with disulfidptosis-related immune checkpoints in GBM and to analyze connections with malignancy.
Two expression matrices from The Cancer Genome Atlas-Genotype Tissue Expression (TCGA-GTEx) and Chinese Glioma Genome Atlas (CGGA) cyber public data were utilized to analyze differentially expressed genes (DEGs) in GBM and interaction networks for DEG-coded proteins constructed with protein-protein interaction network analysis. Functional annotation was conducted to indicate DEG function. Hub genes were identified by machine-learning, using Least Absolute Shrinkage and Selection Operator (LASSO) and Support Vector Machine Recursive Feature Elimination (SVM-RFE). Gene expression, immune cell composition and single-cell expression were assessed via bioinformatics and in vitro assays. Finally, xenograft nude mouse models were constructed for in vivo validation.
35 DEGs were found in the TCGA-GTEx and 13 in the CGGA databases and linked to immune regulation and GBM progression. The key gene CD276 was screened by bioinformatics methods. CD276 had higher expression in GBM tissues than in control and was higher expression in GBM strain than in normal astrocytes. In vitro CD276 knockdown reduced GBM cell malignancy. Furthermore, CD276 knockdown suppressed tumor growth in vivo.
CD276 was the most significant hub gene involved in disulfidptosis and immune checkpoints in GBM. Anti-CD276 therapy may have promise for GBM treatment.
免疫疗法对多形性胶质母细胞瘤(GBM)的治疗具有前景,而二硫键介导的细胞程序性坏死(一种涉及肌动蛋白细胞骨架解体的细胞死亡形式)是一个潜在靶点。本研究的目的是鉴定与GBM中与二硫键介导的细胞程序性坏死相关的免疫检查点相关的基因,并分析其与恶性肿瘤的联系。
利用来自癌症基因组图谱-基因型组织表达(TCGA-GTEx)和中国胶质瘤基因组图谱(CGGA)网络公共数据的两个表达矩阵,分析GBM中的差异表达基因(DEG),并通过蛋白质-蛋白质相互作用网络分析构建DEG编码蛋白的相互作用网络。进行功能注释以表明DEG的功能。使用最小绝对收缩和选择算子(LASSO)和支持向量机递归特征消除(SVM-RFE)通过机器学习鉴定枢纽基因。通过生物信息学和体外试验评估基因表达、免疫细胞组成和单细胞表达。最后,构建异种移植裸鼠模型进行体内验证。
在TCGA-GTEx数据库中发现35个DEG,在CGGA数据库中发现13个DEG,它们与免疫调节和GBM进展相关。通过生物信息学方法筛选出关键基因CD276。CD276在GBM组织中的表达高于对照组,在GBM细胞株中的表达高于正常星形胶质细胞。体外实验中,敲低CD276可降低GBM细胞的恶性程度。此外,敲低CD276可抑制体内肿瘤生长。
CD276是GBM中参与二硫键介导的细胞程序性坏死和免疫检查点的最显著枢纽基因。抗CD276治疗可能对GBM治疗具有前景。