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采用多相方法及对咖啡腐生真菌的全球综述揭示中国咖啡树相关的真菌多样性。

Unveiling fungal diversity associated with coffee trees in China using a polyphasic approach and a global review of coffee saprobic fungi.

作者信息

Lu Li, Karunarathna Samantha C, Rajeshkumar Kunhiraman C, Elgorban Abdallah M, Jayawardena Ruvishika S, Hongsanan Sinang, Suwannarach Nakarin, Kumla Jaturong, Xiong Yin-Ru, Hyde Kevin D, Han Mei-Yan, Zheng De-Ge, Li Qiang, Dai Dong-Qin, Tibpromma Saowaluck

机构信息

Center for Yunnan Plateau Biological Resources Protection and Utilization, Key Laboratory of Yunnan Provincial Department of Education of the Deep-Time Evolution on Biodiversity from the Origin of the Pearl River, College of Biology and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China.

Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.

出版信息

IMA Fungus. 2025 Mar 10;16:e144874. doi: 10.3897/imafungus.16.144874. eCollection 2025.

DOI:10.3897/imafungus.16.144874
PMID:40104159
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11915015/
Abstract

Arabica coffee () is the most cultured and popular coffee bean in today's world. Yunnan Province is well known as China's largest arabica coffee cultivation region. Fungi represent an important group of microorganisms associated with coffee, profoundly influencing its yield and quality. In this study, twelve fungal collections growing on dead and decaying twigs of coffee were collected and isolated to systematically document microfungi associated with coffee plants in Yunnan Province. Ten novel species, each representing a unique family within , were identified and introduced, based on comprehensive morphological analyses and multigene phylogenetic studies. The ten new species belong to the families , , , , , , , , and with each family containing one new species. Macro- and micro-characteristics, descriptions and phylogenetic trees indicating the placement of the new taxa are provided. In addition, pairwise homoplasy index (PHI) test results and morphological comparisons between the new species and closely-related taxa are given. This study also establishes a comprehensive global inventory of saprobic fungi associated with coffee, which is intended to help researchers and professionals worldwide with practical information. This research enhances the understanding of coffee-associated fungal diversity in China and underscores the importance of introducing new saprobic fungal taxa related to coffee.

摘要

阿拉比卡咖啡()是当今世界种植最广泛且最受欢迎的咖啡豆。云南省是中国著名的最大阿拉比卡咖啡种植区。真菌是与咖啡相关的一类重要微生物,对咖啡的产量和品质有深远影响。在本研究中,收集并分离了在咖啡枯枝和腐枝上生长的12份真菌样本,以系统记录云南省与咖啡植株相关的微真菌。基于全面的形态学分析和多基因系统发育研究,鉴定并介绍了10个新物种,每个新物种代表内的一个独特科。这10个新物种分别属于、、、、、、、和科,每个科包含一个新物种。提供了新分类单元的宏观和微观特征、描述以及表明其位置的系统发育树。此外,还给出了成对同塑性指数(PHI)测试结果以及新物种与近缘类群之间的形态比较。本研究还建立了与咖啡相关的腐生真菌的全面全球清单,旨在为全球的研究人员和专业人士提供实用信息。这项研究增进了对中国与咖啡相关真菌多样性的理解,并强调了引入与咖啡相关的新腐生真菌分类单元的重要性。

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本文引用的文献

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Catalogue of fungi in China 1. New taxa of plant-inhabiting fungi.《中国真菌名录》1. 植物寄生真菌新分类群。
Mycology. 2024 Mar 21;16(1):1-58. doi: 10.1080/21501203.2024.2316066. eCollection 2025.
2
Fungal Planet description sheets: 1697-1780.真菌星球描述单:1697 - 1780
Fungal Syst Evol. 2024 Dec;14:325-577. doi: 10.3114/fuse.2024.14.19. Epub 2024 Dec 6.
3
Additional new species of Xenodidymella from pasture-medicinal plants in Iran.来自伊朗牧场药用植物的 Xenodidymella 新种。
Antonie Van Leeuwenhoek. 2024 Aug 1;117(1):110. doi: 10.1007/s10482-024-02007-2.
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Taxonomic novelties and global biogeography of (Ascomycota, Didymosphaeriaceae).(子囊菌门,座囊菌科)的分类新物种及全球生物地理学
MycoKeys. 2024 Jan 19;101:191-232. doi: 10.3897/mycokeys.101.113259. eCollection 2024.
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On the origin of bird's nest fungi: Phylogenomic analyses of fungi in the Nidulariaceae (Agaricales, Basidiomycota).论鸟巢菌的起源:鸟巢菌科(伞菌目,担子菌门)真菌的系统基因组学分析
Mol Phylogenet Evol. 2024 Apr;193:108010. doi: 10.1016/j.ympev.2024.108010. Epub 2024 Jan 7.
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MycoKeys. 2022 Dec 12;94:51-71. doi: 10.3897/mycokeys.94.95751. eCollection 2022.
7
Plant and fungal species interactions differ between aboveground and belowground habitats in mountain forests of eastern China.在中国东部山区森林中,地上和地下栖息地的植物与真菌物种相互作用存在差异。
Sci China Life Sci. 2023 May;66(5):1134-1150. doi: 10.1007/s11427-022-2174-3. Epub 2022 Dec 1.
8
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J Fungi (Basel). 2022 Oct 21;8(10):1113. doi: 10.3390/jof8101113.
9
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J Fungi (Basel). 2022 Jul 9;8(7):720. doi: 10.3390/jof8070720.
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gen. et sp. nov. and Two New Species of (Massarinaceae, Pleosporales) from Sichuan Province, China.中国四川省炭角菌科(日规壳目)的新属、新种及两个新物种
J Fungi (Basel). 2022 Jul 5;8(7):712. doi: 10.3390/jof8070712.