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通过切换选择性决定因素将硫氧还蛋白h型功能重编码为光合f型

Functional recoding of thioredoxin type-h into photosynthetic type-f by switching selectivity determinants.

作者信息

Lemaire Stéphane D, Lombardi Gianluca, Mancini Andrea, Carbone Alessandra, Henri Julien

机构信息

Sorbonne Université, CNRS, Laboratoire de Biologie Computationnelle et Quantitative LCQB, Paris, France.

Institut Universitaire de France, Paris, France.

出版信息

Front Plant Sci. 2025 Mar 6;16:1554272. doi: 10.3389/fpls.2025.1554272. eCollection 2025.

Abstract

Thioredoxins are ubiquitous disulfide reductases folded as an α/β domain of 100-120 amino acid residues. Functional redox site is composed of a pair of cysteines in a canonical WCGPC pentapeptide exposed at the surface of thioredoxins, that reduces disulfide bonds on target proteins. Several genetic isoforms of thioredoxins are phylogenetically classified into seven types, including type-h involved in general functions in the cytosol and type-f specifically associated to photosynthetic functions in chloroplasts. Specialization of thioredoxin function is correlated to its selectivity towards a type-dependent repertoire of protein targets. In this study, we combined biochemical and computational approaches to identify amino acid residues of photosynthetic type-f thioredoxin contributing to target the Calvin-Benson-Bassham cycle enzymes fructose-1,6-bisphosphatase and sedoheptulose-1,7-bisphosphatase. By introducing these residues into the scaffold of type-h thioredoxin, we generated a synthetic chimera of thioredoxin-h active towards photosynthetic fructose-1,6-bisphosphatase . Our combined computational and experimental approach provides a general pipeline for the design of molecular switches, enabling precise functional control.

摘要

硫氧还蛋白是普遍存在的二硫键还原酶,折叠成由100 - 120个氨基酸残基组成的α/β结构域。功能性氧化还原位点由位于硫氧还蛋白表面的典型WCGPC五肽中的一对半胱氨酸组成,其可还原靶蛋白上的二硫键。硫氧还蛋白的几种基因亚型在系统发育上分为七种类型,包括参与细胞质一般功能的h型和与叶绿体光合功能特异性相关的f型。硫氧还蛋白功能的特化与其对依赖类型的蛋白质靶标库的选择性相关。在本研究中,我们结合生化和计算方法来鉴定光合f型硫氧还蛋白中有助于靶向卡尔文-本森-巴斯姆循环酶果糖-1,6-二磷酸酶和景天庚酮糖-1,7-二磷酸酶的氨基酸残基。通过将这些残基引入h型硫氧还蛋白的支架中,我们生成了对光合果糖-1,6-二磷酸酶具有活性的硫氧还蛋白-h合成嵌合体。我们结合计算和实验的方法为分子开关的设计提供了一个通用流程,实现精确的功能控制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b8d/11922929/e9dff1d8933d/fpls-16-1554272-g001.jpg

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