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非血红素铁酶催化C-H叠氮化反应中对映选择性和化学选择性的机理及起源的簇模型研究

Cluster model study of the mechanism and origins of enantio- and chemoselectivity in non-heme iron enzyme-catalyzed C-H azidation.

作者信息

Liu Hang, Chen Xiahe, Wu Hongli, She Yuanbin, Yang Yun-Fang

机构信息

College of Chemical Engineering, Zhejiang University of Technology Hangzhou Zhejiang 310014 China

出版信息

RSC Adv. 2025 Mar 24;15(12):8931-8937. doi: 10.1039/d5ra00632e. eCollection 2025 Mar 21.

Abstract

The mechanisms and enantio- and chemoselectivities of non-heme iron enzyme-catalyzed C-H azidation were investigated using density functional theory (DFT) calculations. A detailed active site cluster model comprising 337 atoms was constructed, incorporating essential features of the first- and second-coordination spheres and substrate-binding pockets. The catalytic cycle involves N-F bond activation, hydrogen atom transfer (HAT), and radical rebound steps. DFT calculations suggest that the observed enantioselectivity arises from steric effects between the substrate and key active-site residues. Additionally, in the non-heme Fe(N)F complex, the Fe-N bond, which has a lower diabatic bond dissociation energy, preferentially rebounds to form the azidation product.

摘要

利用密度泛函理论(DFT)计算研究了非血红素铁酶催化C-H叠氮化反应的机理、对映选择性和化学选择性。构建了一个包含337个原子的详细活性位点簇模型,纳入了第一和第二配位层以及底物结合口袋的基本特征。催化循环包括N-F键活化、氢原子转移(HAT)和自由基反弹步骤。DFT计算表明,观察到的对映选择性源于底物与关键活性位点残基之间的空间效应。此外,在非血红素Fe(N)F络合物中,具有较低非绝热键解离能的Fe-N键优先反弹形成叠氮化产物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8032/11931506/5a5347fc2bf5/d5ra00632e-s1.jpg

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