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七岁儿童哮喘的亲本来源效应

Parent-of-Origin Effects in Childhood Asthma at Seven Years of Age.

作者信息

Lee Yunsung, Gjerdevik Miriam, Jugessur Astanand, Gjessing Håkon Kristian, Corfield Elizabeth, Havdahl Alexandra, Harris Jennifer Ruth, Magnus Maria Christine, Håberg Siri Eldevik, Magnus Per

机构信息

Centre for Fertility and Health, Norwegian Institute of Public Health, Oslo, Norway.

Department of Computer Science, Electrical Engineering and Mathematical Sciences, Western Norway University of Applied Sciences, Bergen, Norway.

出版信息

Genet Epidemiol. 2025 Apr;49(3):e70007. doi: 10.1002/gepi.70007.

Abstract

Childhood asthma is more common among children whose mothers have asthma than among those whose fathers have asthma. The reasons for this are unknown, and we hypothesize that genomic imprinting may partly explain this observation. Our aim is to assess parent-of-origin (PoO) effects on childhood asthma by analyzing SNP array genotype data from a large population-based cohort. To estimate PoO effects in parent-reported childhood asthma at 7 years of age, we fit a log-linear model implemented in the HAPLIN R package to SNP array genotype data from 915 mother-father-child case triads, 603 mother-child case dyads, and 113 father-child case dyads participating in the Norwegian Mother, Father, and Child Cohort Study (MoBa). We found that alleles at two SNPs-rs3003214 and rs3003211-near the adenylosuccinate synthase 2 gene (ADSS2 on chromosome 1q44) showed significant PoO effects at a false positive rate ≤ 0.05. The ratio of the effect of the maternally and paternally inherited G-allele at rs3003214 was 1.68 (95% CI: 1.41-2.03, p value = 1.13E-08). Our results suggest PoO effects at the ADSS2 gene, particularly the maternally inherited G-allele at rs3003214, may contribute to the maternal effect in childhood asthma.

摘要

儿童哮喘在母亲患有哮喘的儿童中比在父亲患有哮喘的儿童中更为常见。其原因尚不清楚,我们推测基因组印记可能部分解释了这一现象。我们的目的是通过分析来自一个大型基于人群的队列的单核苷酸多态性(SNP)阵列基因型数据,评估亲代来源(PoO)对儿童哮喘的影响。为了估计7岁时父母报告的儿童哮喘中的PoO效应,我们将HAPLIN R包中实现的对数线性模型应用于来自参与挪威母亲、父亲和儿童队列研究(MoBa)的915个母亲 - 父亲 - 儿童病例三联体、603个母亲 - 儿童病例二元组和113个父亲 - 儿童病例二元组的SNP阵列基因型数据。我们发现,在1号染色体q44上的腺苷酸琥珀酸合酶2基因(ADSS2)附近的两个SNP——rs3003214和rs3003211的等位基因,在假阳性率≤0.05时显示出显著的PoO效应。rs3003214处母系和父系遗传的G等位基因的效应比为1.68(95%置信区间:1.41 - 2.03,p值 = 1.13E - 08)。我们的结果表明,ADSS2基因处的PoO效应,特别是rs3003214处母系遗传的G等位基因,可能导致儿童哮喘中的母系效应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/158f/11937430/77411b297d21/GEPI-49-0-g001.jpg

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