Department of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Centre for Medical Genetics & Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan, China.
J Hum Genet. 2022 Dec;67(12):687-690. doi: 10.1038/s10038-022-01074-5. Epub 2022 Aug 22.
Recent researches on Parkinson's disease (PD) pathogenesis discovered the correlation between PD and peroxisome proliferator-activated receptor gamma coactivator-1α (PGC-1α) dysfunction and reduction of PPARGC1A gene expression. Hence, we detected PPARGC1A rare variants to clarify their effect on PD risk in a large population of PD patients in mainland China.
We applied whole-exome sequencing (WES) to 1917 patients with early-onset or familial PD and 1652 controls (WES cohort), and whole-genome sequencing (WGS) to 1962 patients with sporadic late-onset PD and 1279 controls (WGS cohort). To identify PPARGC1A rare variants, we used burden analysis to assess the relationship between PPARGC1A rare variants and PD susceptibility.
30 rare missense variants in the cohort WES and 21 missense variants in the cohort WGS have been detected in the study and PPARGC1A missense variants are significantly associated with early-onset and familial PD susceptibility in our study (P = 0.012), which supports evidence that PPARGC1A rare variants are involved in the onset of early-onset and familial PD.
The study suggested that PPARGC1A rare variants may contribute to the risk of early-onset and familial PD.
最近对帕金森病(PD)发病机制的研究发现,PD 与过氧化物酶体增殖物激活受体γ共激活因子-1α(PGC-1α)功能障碍和 PPARGC1A 基因表达减少有关。因此,我们检测了 PPARGC1A 罕见变异,以在中国大陆的大量 PD 患者中阐明它们对 PD 风险的影响。
我们应用全外显子组测序(WES)对 1917 名早发性或家族性 PD 患者和 1652 名对照(WES 队列),以及全基因组测序(WGS)对 1962 名散发性晚发性 PD 患者和 1279 名对照(WGS 队列)进行检测。为了鉴定 PPARGC1A 罕见变异,我们采用了负担分析来评估 PPARGC1A 罕见变异与 PD 易感性之间的关系。
在研究中,我们在 WES 队列中检测到 30 个罕见错义变异,在 WGS 队列中检测到 21 个错义变异,PPARGC1A 错义变异与本研究中早发性和家族性 PD 易感性显著相关(P=0.012),这支持了 PPARGC1A 罕见变异参与早发性和家族性 PD 发病的证据。
该研究表明,PPARGC1A 罕见变异可能导致早发性和家族性 PD 的发病风险增加。