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两种检测方法的故事:现代供体来源游离DNA技术的比较

Tale of two assays: Comparison of modern donor-derived cell-free DNA technologies.

作者信息

Hsi Brian, Van Zyl Johanna, Alam Komal, Shakoor Hira, Farsakh Dana, Alam Amit, Hall Shelley

机构信息

Baylor University Medical Center, Dallas, Texas.

New York University School of Medicine, New York, New York.

出版信息

JHLT Open. 2024 Apr 1;4:100090. doi: 10.1016/j.jhlto.2024.100090. eCollection 2024 May.

Abstract

Little is known about the comparative differences between the Allosure (CareDx) and Prospera (Natera) donor-derived cell-free DNA (dd-cfDNA) assays following heart transplantation. We retrospectively analyzed 248 consecutive samples that had both dd-cfDNA assays simultaneously performed. Twenty-six biopsy specimens were available within 7 days from dd-cfDNA assays. Both dd-cfDNA assays were correctly suggestive of rejection when biopsy was available. However, discordant classifications were present in 23/248 samples when utilizing respective recommended cutoff values for each assay (0.12% for Allosure and 0.15% for Prospera). Discordance was due to increased classification as abnormal results with Allosure (McNemar's  = 0.004). However, there were no significant differences between assays when identical thresholds of 0.12% or 0.15% were implemented for both assays (McNemar's,  = non-significant). We conclude that both dd-cfDNA assays can be utilized interchangeably for surveillance of rejection following heart transplantation.

摘要

关于心脏移植后Allosure(CareDx公司)和Prospera(Natera公司)供体来源的游离DNA(dd-cfDNA)检测之间的比较差异,目前所知甚少。我们回顾性分析了248份连续的样本,这些样本同时进行了两种dd-cfDNA检测。在进行dd-cfDNA检测后的7天内可获得26份活检标本。当有活检标本时,两种dd-cfDNA检测均能正确提示排斥反应。然而,当使用每种检测各自推荐的临界值时(Allosure为0.12%,Prospera为0.15%),248份样本中有23份出现了不一致的分类。不一致是由于Allosure将更多结果分类为异常(McNemar检验=0.004)。然而,当两种检测都采用0.12%或0.15%的相同临界值时,检测之间没有显著差异(McNemar检验,无显著性)。我们得出结论,两种dd-cfDNA检测均可交替用于心脏移植后排斥反应的监测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ecc2/11935440/a476fd4be1f3/gr1.jpg

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