Pierre Herma C, Patel Devyani J, Raja Huzefa A, Darveaux Blaise A, Patel Krupa I, Mardiana Lina, Longcake Alexandra, Hall Michael J, Probert Michael R, Pearce Cedric J, Oberlies Nicholas H
Department of Chemistry and Biochemistry, University of North Carolina at Greensboro, P.O. Box 26170, Greensboro, NC, 27402, United States.
Mycosynthetix, Inc., Hillsborough, NC, 27278, United States.
Phytochemistry. 2025 Aug;236:114492. doi: 10.1016/j.phytochem.2025.114492. Epub 2025 Mar 25.
Verticillins, epipolythiodioxopiperazine alkaloids that were first described over 50 years ago, have undergone extensive cytotoxic and pharmacological evaluations over the last decade. However, of the 27 verticillin analogues in the literature, the chemistry of verticillin D, which has two additional secondary hydroxy moieties, relative to verticillin A, has remained largely unexplored since its discovery in 1999. With the goal of advancing our understanding of verticillin D, there were three main objectives with this study: improving production, streamlining purification, and assigning absolute configuration via X-ray crystallography. To begin, the production of verticillin D was analyzed across seven fungal strains, and the top producer was further assessed under two fermentation conditions. Clonostachys rosea (strain MSX51257) biosynthesized the highest amount of verticillin D, with production peaking between 15 and 25 days on rice media. Interestingly, in contrast to similar studies that yield verticillin A, the biosynthesis of verticillin D was not accompanied by a suite of structurally related verticillin analogues. As such, the purification of verticillin D was more rapid and could be accomplished without the use of HPLC. These materials were used, in part, to determine the absolute configuration of verticillin D via X-ray crystallography, allowing for assignment of the asymmetric centers at both the 13 and 13' positions as R, which has never been accomplished. This is only the third report of an X-ray structure of a verticillin analogue.
轮枝菌素是一类环肽类生物碱,50多年前首次被描述,在过去十年中,人们对其进行了广泛的细胞毒性和药理学评估。然而,在文献报道的27种轮枝菌素类似物中,相对于轮枝菌素A,具有两个额外仲羟基部分的轮枝菌素D的化学性质自1999年被发现以来,在很大程度上仍未得到探索。为了加深我们对轮枝菌素D的理解,本研究有三个主要目标:提高产量、简化纯化过程以及通过X射线晶体学确定其绝对构型。首先,分析了七种真菌菌株中轮枝菌素D的产量,并在两种发酵条件下对产量最高的菌株进行了进一步评估。粉红粘帚霉(菌株MSX51257)生物合成的轮枝菌素D量最高,在水稻培养基上培养15至25天时产量达到峰值。有趣的是,与产生轮枝菌素A的类似研究不同,轮枝菌素D的生物合成并没有伴随着一系列结构相关的轮枝菌素类似物。因此,轮枝菌素D的纯化过程更快,无需使用高效液相色谱法即可完成。这些材料部分用于通过X射线晶体学确定轮枝菌素D的绝对构型,从而确定13和13'位置的不对称中心均为R构型,这是此前从未实现过的。这是关于轮枝菌素类似物X射线结构的第三篇报道。