Wu Xiaoyan, Li Yiman, Chen Jilong, Chen Jie, Zhang Wenchuan, Lu Xunxi, Zhong Xiaorong, Zhu Min, Yi Yuhao, Bu Hong
Department of Pathology, West China Hospital, Sichuan University, Chengdu, China.
Institute of Clinical Pathology, West China Hospital, Sichuan University, Chengdu, 610041, China.
Breast Cancer Res. 2025 Mar 28;27(1):27. doi: 10.1186/s13058-025-01968-0.
In HR+/HER2- early breast cancer (EBC) patients, approximately one-third of stage II and 50% of stage III patients experience recurrence, with poor outcomes after recurrence. Given that these patients commonly undergo adjuvant chemo-endocrine therapy (C-ET), accurately predicting the recurrence risk is crucial for optimizing treatment strategies and improving patient outcomes.
We collected postoperative histopathological slides from 1095 HR+/HER2- EBC who received C-ET and were followed for more than five years at West China Hospital, Sichuan University. Two deep learning pipelines were developed and validated: ACMIL-based and CLAM-based. Both pipelines, designed to predict recurrence risk post-treatment, were based on pretrained feature encoders and multi-instance learning with attention mechanisms. Model performance was evaluated using a five-fold cross-validation approach and externally validated on HR+/HER2- EBC patients from the TCGA cohort.
Both ACMIL-based and CLAM-based pipelines performed well in predicting recurrence risk, with UNI-ACMIL demonstrating superior performance across multiple metrics. The average area under the curve (AUC) for the UNI-ACMIL pipeline in the five-fold cross-validation test set was 0.86 ± 0.02, and 0.80 ± 0.04 in the TCGA cohort. In the five-fold cross-validation test sets, effectively stratified patients into high-risk and low-risk groups, demonstrating significant prognostic differences. Hazard ratios for recurrence-free survival (RFS) ranged from 5.32 (95% CI 1.86-15.12) to 15.16 (95% CI 3.61-63.56). Moreover, among six different multimodal recurrence risk models, the WSI-based risk score was identified as the most significant contributor.
Our multimodal recurrence risk prediction model is a practical and reliable tool that enhances the predictive power of existing systems relying solely on clinicopathological parameters. It offers improved recurrence risk prediction for HR+/HER2- EBC patients following adjuvant C-ET, supporting personalized treatment and better patient outcomes.
在激素受体阳性/人表皮生长因子受体2阴性(HR+/HER2-)早期乳腺癌(EBC)患者中,约三分之一的II期患者和50%的III期患者会出现复发,复发后的预后较差。鉴于这些患者通常接受辅助化疗-内分泌治疗(C-ET),准确预测复发风险对于优化治疗策略和改善患者预后至关重要。
我们收集了四川大学华西医院1095例接受C-ET且随访超过五年的HR+/HER2- EBC患者的术后组织病理学切片。开发并验证了两种深度学习管道:基于ACMIL的和基于CLAM的。这两种管道旨在预测治疗后的复发风险,均基于预训练的特征编码器和带有注意力机制的多实例学习。使用五折交叉验证方法评估模型性能,并在来自TCGA队列的HR+/HER2- EBC患者中进行外部验证。
基于ACMIL的和基于CLAM的管道在预测复发风险方面均表现良好,其中UNI-ACMIL在多个指标上表现出卓越性能。在五折交叉验证测试集中,UNI-ACMIL管道的平均曲线下面积(AUC)为0.86±0.02,在TCGA队列中为0.80±0.04。在五折交叉验证测试集中,能有效地将患者分为高风险和低风险组,显示出显著的预后差异。无复发生存(RFS)的风险比范围为5.32(95%置信区间1.86 - 15.12)至15.16(95%置信区间3.61 - 63.56)。此外,在六种不同的多模态复发风险模型中,基于全切片图像(WSI)的风险评分被确定为最显著的因素。
我们的多模态复发风险预测模型是一种实用且可靠的工具,增强了仅依赖临床病理参数的现有系统的预测能力。它为接受辅助C-ET后的HR+/HER2- EBC患者提供了更好的复发风险预测,支持个性化治疗并改善患者预后。