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一种补体样毒素成孔活性的结构基础

Structural basis for the pore-forming activity of a complement-like toxin.

作者信息

Johnstone Bronte A, Christie Michelle P, Joseph Riya, Morton Craig J, Brown Hamish G, Hanssen Eric, Sanford Tristan C, Abrahamsen Hunter L, Tweten Rodney K, Parker Michael W

机构信息

Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC 3010, Australia.

ARC Centre for Cryo-Electron Microscopy of Membrane Proteins, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC 3010, Australia.

出版信息

Sci Adv. 2025 Mar 28;11(13):eadt2127. doi: 10.1126/sciadv.adt2127.

DOI:10.1126/sciadv.adt2127
PMID:40153490
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11952106/
Abstract

Pore-forming proteins comprise a highly diverse group of proteins exemplified by the membrane attack complex/perforin (MACPF), cholesterol-dependent cytolysin (CDC), and gasdermin superfamilies, which all form gigantic pores (>150 angstroms). A recently found family of pore-forming toxins, called CDC-like proteins (CDCLs), are wide-spread in gut microbes and are a prevalent means of antibacterial antagonism. However, the structural aspects of how CDCLs assemble a pore remain a mystery. Here, we report the crystal structure of a proteolytically activated CDCL and cryo-electron microscopy structures of a prepore-like intermediate and a transmembrane pore providing detailed snapshots across the entire pore-forming pathway. These studies reveal a sophisticated array of regulatory features to ensure productive pore formation, and, thus, CDCLs straddle the MACPF, CDC, and gasdermin lineages of the giant pore superfamilies.

摘要

成孔蛋白构成了一类高度多样化的蛋白质,以膜攻击复合物/穿孔素(MACPF)、胆固醇依赖性细胞溶素(CDC)和gasdermin超家族为代表,它们都能形成巨大的孔(>150埃)。最近发现的一类成孔毒素,称为CDC样蛋白(CDCL),广泛存在于肠道微生物中,是一种普遍的抗菌拮抗手段。然而,CDCL如何组装成孔的结构方面仍是个谜。在这里,我们报告了一种经蛋白水解激活的CDCL的晶体结构,以及一种类似前孔中间体和跨膜孔的冷冻电子显微镜结构,提供了整个成孔途径的详细快照。这些研究揭示了一系列复杂的调节特征,以确保有效的孔形成,因此,CDCL跨越了巨型孔超家族的MACPF、CDC和gasdermin谱系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/9a2e4457cda6/sciadv.adt2127-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/d2196d613f22/sciadv.adt2127-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/abdfbc3b5bb3/sciadv.adt2127-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/e2608ecf5c49/sciadv.adt2127-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/a55dd46114d7/sciadv.adt2127-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/acb860a369c9/sciadv.adt2127-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/9a2e4457cda6/sciadv.adt2127-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/d2196d613f22/sciadv.adt2127-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/abdfbc3b5bb3/sciadv.adt2127-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/e2608ecf5c49/sciadv.adt2127-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/a55dd46114d7/sciadv.adt2127-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/acb860a369c9/sciadv.adt2127-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43f0/11952106/9a2e4457cda6/sciadv.adt2127-f6.jpg

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本文引用的文献

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Distant relatives of a eukaryotic cell-specific toxin family evolved a complement-like mechanism to kill bacteria.真核细胞特异性毒素家族的远亲进化出了一种补体样机制来杀死细菌。
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Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.无分裂依赖性的古真核 GASDermins 激活及其结构机制。
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Structure and assembly of a bacterial gasdermin pore.细菌天冬氨酸蛋白酶孔的结构与组装。
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UCSF ChimeraX: Tools for structure building and analysis.UCSF ChimeraX:结构构建和分析工具。
Protein Sci. 2023 Nov;32(11):e4792. doi: 10.1002/pro.4792.
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Structural journey of an insecticidal protein against western corn rootworm.杀虫蛋白抗西部玉米根虫的结构之旅。
Nat Commun. 2023 Jul 13;14(1):4171. doi: 10.1038/s41467-023-39891-7.
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Perforin-2 is a pore-forming effector of endocytic escape in cross-presenting dendritic cells.穿孔素-2 是呈递交叉抗原的树突状细胞内吞逃逸的孔形成效应因子。
Science. 2023 Jun 23;380(6651):1258-1265. doi: 10.1126/science.adg8802. Epub 2023 Jun 22.
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Structural mechanisms for regulation of GSDMB pore-forming activity.GSDMB 孔形成活性调节的结构机制。
Nature. 2023 Apr;616(7957):598-605. doi: 10.1038/s41586-023-05872-5. Epub 2023 Mar 29.
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Structural basis for GSDMB pore formation and its targeting by IpaH7.8.GSDMB 孔形成的结构基础及其被 IpaH7.8 靶向。
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Cryo-EM structures of perforin-2 in isolation and assembled on a membrane suggest a mechanism for pore formation.冷冻电镜结构显示,穿孔素-2 在孤立状态和组装在膜上时的结构,为其形成孔道的机制提供了线索。
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