Suppr超能文献

头颈部鳞状细胞癌中糖酵解和乳酸代谢基因的生物信息学分析

Bioinformatic analysis of glycolysis and lactate metabolism genes in head and neck squamous cell carcinoma.

作者信息

Jiang Huanyu, Zhou Lijuan, Zhang Haidong, Yu Zhenkun

机构信息

School of Medicine, Southeast University, 87 Dingjiaqiao, Hunan Road, Nanjing, 210009, Jiangsu, China.

Department of Otolaryngology Head and Neck Surgery, The Affiliated Benq Hospital of Nanjing Medical University, Nanjing, 210019, Jiangsu, China.

出版信息

Sci Rep. 2025 Mar 28;15(1):10781. doi: 10.1038/s41598-025-94843-z.

Abstract

Head and neck squamous cell carcinoma (HNSCC) is a heterogeneous cancer with significant global incidence. This study investigates glycolysis- and lactate metabolism-related genes (GALMRGs) in HNSCC, focusing on their impact on prognosis, the tumor immune microenvironment, and their potential as therapeutic biomarkers. Analysis of data from the Cancer Genome Atlas and Gene Expression Omnibus identified 16 GALMRGs that were differentially expressed in HNSCC compared to normal tissues. Functional analysis revealed the involvement of lactate and pyruvate metabolism and HIF-1 signaling pathways. Weighted gene co-expression network analysis identified two module genes, CDKN3 and SLC2A1. Five key genes (CAV1, CDKN3, LDHA, MB, and PER2) were identified through univariate, multivariate, and LASSO regression analyses and used to construct a prognostic model. This model demonstrated strong predictive accuracy for overall survival, stratifying patients into high- and low-risk groups. Immune cell infiltration analysis showed a negative correlation between resting and activated mast cells, and low-risk patients had higher tumor mutational burden, suggesting a better response to immunotherapy. Consensus clustering classified HNSCC into two distinct molecular subtypes with differing expression of the key genes. This GALMRG-based prognostic model is a promising biomarker for predicting HNSCC outcomes and immunotherapy responses, providing valuable insights for personalized treatment strategies.

摘要

头颈部鳞状细胞癌(HNSCC)是一种异质性癌症,在全球发病率较高。本研究调查了HNSCC中与糖酵解和乳酸代谢相关的基因(GALMRGs),重点关注它们对预后、肿瘤免疫微环境的影响以及作为治疗生物标志物的潜力。对来自癌症基因组图谱和基因表达综合数据库的数据进行分析,确定了16个在HNSCC中与正常组织相比差异表达的GALMRGs。功能分析揭示了乳酸和丙酮酸代谢以及HIF-1信号通路的参与。加权基因共表达网络分析确定了两个模块基因,CDKN3和SLC2A1。通过单变量、多变量和LASSO回归分析确定了五个关键基因(CAV1、CDKN3、LDHA、MB和PER2),并用于构建预后模型。该模型对总生存期具有很强的预测准确性,可将患者分为高风险和低风险组。免疫细胞浸润分析显示静息肥大细胞和活化肥大细胞之间呈负相关,低风险患者具有更高的肿瘤突变负担,提示对免疫治疗有更好的反应。共识聚类将HNSCC分为两种不同的分子亚型,关键基因的表达不同。这种基于GALMRG的预后模型是预测HNSCC预后和免疫治疗反应的有前景的生物标志物,为个性化治疗策略提供了有价值的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2cb2/11953422/5b84c5c275aa/41598_2025_94843_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验