Zhang Kangling, Jagannath Chinnaswamy
Department of Pharmacology and Toxicology, School of Medicine, University of Texas Medical Branch, Galveston, TX, USA.
Department of Pathology and Genomic Medicine, Houston Methodist Research Institute, Weill-Cornell Medicine, Houston, TX, USA.
Epigenetics Chromatin. 2025 Mar 29;18(1):16. doi: 10.1186/s13072-025-00575-9.
Macrophage polarization is a dynamic process driven by a complex interplay of cytokine signaling, metabolism, and epigenetic modifications mediated by pathogens. Upon encountering specific environmental cues, monocytes differentiate into macrophages, adopting either a pro-inflammatory (M1) or anti-inflammatory (M2) phenotype, depending on the cytokines present. M1 macrophages are induced by interferon-gamma (IFN-γ) and are characterized by their reliance on glycolysis and their role in host defense. In contrast, M2 macrophages, stimulated by interleukin-4 (IL-4) and interleukin-13 (IL-13), favor oxidative phosphorylation and participate in tissue repair and anti-inflammatory responses. Metabolism is tightly linked to epigenetic regulation, because key metabolic intermediates such as acetyl-coenzyme A (CoA), α-ketoglutarate (α-KG), S-adenosylmethionine (SAM), and nicotinamide adenine dinucleotide (NAD) serve as cofactors for chromatin-modifying enzymes, which in turn, directly influences histone acetylation, methylation, RNA/DNA methylation, and protein arginine methylation. These epigenetic modifications control gene expression by regulating chromatin accessibility, thereby modulating macrophage function and polarization. Histone acetylation generally promotes a more open chromatin structure conducive to gene activation, while histone methylation can either activate or repress gene expression depending on the specific residue and its methylation state. Crosstalk between histone modifications, such as acetylation and methylation, further fine-tunes macrophage phenotypes by regulating transcriptional networks in response to metabolic cues. While arginine methylation primarily functions in epigenetics by regulating gene expression through protein modifications, the degradation of methylated proteins releases arginine derivatives like asymmetric dimethylarginine (ADMA), which contribute directly to arginine metabolism-a key factor in macrophage polarization. This review explores the intricate relationships between metabolism and epigenetic regulation during macrophage polarization. A better understanding of this crosstalk will likely generate novel therapeutic insights for manipulating macrophage phenotypes during infections like tuberculosis and inflammatory diseases such as diabetes.
巨噬细胞极化是一个由细胞因子信号传导、代谢以及病原体介导的表观遗传修饰之间复杂相互作用驱动的动态过程。在遇到特定的环境线索时,单核细胞分化为巨噬细胞,根据存在的细胞因子,呈现促炎(M1)或抗炎(M2)表型。M1巨噬细胞由干扰素-γ(IFN-γ)诱导,其特征在于依赖糖酵解及其在宿主防御中的作用。相比之下,由白细胞介素-4(IL-4)和白细胞介素-13(IL-13)刺激的M2巨噬细胞则倾向于氧化磷酸化,并参与组织修复和抗炎反应。代谢与表观遗传调控紧密相连,因为关键代谢中间体如乙酰辅酶A(CoA)、α-酮戊二酸(α-KG)、S-腺苷甲硫氨酸(SAM)和烟酰胺腺嘌呤二核苷酸(NAD)作为染色质修饰酶的辅助因子,进而直接影响组蛋白乙酰化、甲基化、RNA/DNA甲基化和蛋白质精氨酸甲基化。这些表观遗传修饰通过调节染色质可及性来控制基因表达,从而调节巨噬细胞功能和极化。组蛋白乙酰化通常促进更开放的染色质结构,有利于基因激活,而组蛋白甲基化根据特定残基及其甲基化状态可激活或抑制基因表达。组蛋白修饰(如乙酰化和甲基化)之间的相互作用通过响应代谢线索调节转录网络,进一步微调巨噬细胞表型。虽然精氨酸甲基化主要通过蛋白质修饰调节基因表达在表观遗传学中发挥作用,但甲基化蛋白质的降解会释放出不对称二甲基精氨酸(ADMA)等精氨酸衍生物,它们直接促进精氨酸代谢——巨噬细胞极化的关键因素。本综述探讨了巨噬细胞极化过程中代谢与表观遗传调控之间的复杂关系。更好地理解这种相互作用可能会为在结核病等感染和糖尿病等炎症性疾病中操纵巨噬细胞表型产生新的治疗见解。