Smalheiser Neil R, Shahidehpour Andrew, Troy Ang Michael
Department of Psychiatry, University Of Illinois College of Medicine, Chicago, IL 60612 USA.
medRxiv. 2025 Mar 11:2025.03.10.25323694. doi: 10.1101/2025.03.10.25323694.
Accurate, consistent indexing of biomedical publications is important for retrieving and evaluating evidence, that in turn can affect clinical decisions, evidence syntheses and research directions. Adaptive trials are arguably among the most complex clinical trial designs, being defined as trials in which the allocation or intervention given to subjects is not fixed in advance, but can vary according to the responses or characteristics of the participants. In the course of preparing to tackle the automated indexing of adaptive clinical trial articles, we manually examined the PubMed articles bearing the Adaptive Clinical Trial publication type to date and identified a surprisingly high proportion of erroneous and questionable indexing decisions. If one agrees that each article should be indexed according to its own study design (rather than the study design of the larger trial that it is linked to), then 46.7% of the articles were mis-assigned. If we consider that articles which presented partial results (e.g., one arm of a multi-arm trial) might be broadly deserving of being indexed as adaptive trials, then the adjusted error rate would still be 24.2%. These errors are worth discussing in detail because they have more general lessons to teach us - not only for biomedical end-users who want to utilize indexing terms for efficient retrieval, but for indexers who need to annotate articles accurately and consistently.
生物医学出版物的准确、一致索引对于检索和评估证据很重要,而这反过来又会影响临床决策、证据综合和研究方向。适应性试验可以说是最复杂的临床试验设计之一,其定义为给予受试者的分配或干预不是预先确定的,而是可以根据参与者的反应或特征而变化。在准备处理适应性临床试验文章的自动索引过程中,我们人工检查了迄今为止带有“适应性临床试验”出版物类型的PubMed文章,发现错误和有问题的索引决策比例高得出奇。如果有人同意每篇文章应根据其自身的研究设计进行索引(而不是与其相关的更大试验的研究设计),那么46.7%的文章被错误归类。如果我们认为呈现部分结果的文章(例如,多臂试验的一个臂)大致值得被索引为适应性试验,那么调整后的错误率仍将为24.2%。这些错误值得详细讨论,因为它们能给我们带来更普遍的教训——不仅对想要使用索引词进行高效检索的生物医学终端用户,而且对需要准确、一致地注释文章的索引编制人员来说都是如此。