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Rad51和Dmc1核蛋白丝内由ATP水解驱动的结构转变。

ATP hydrolysis-driven structural transitions within the Rad51 and Dmc1 nucleoprotein filaments.

作者信息

Shin Yeonoh, Kim Stefan Y, Greene Eric C

机构信息

Department of Biochemistry & Molecular Biophysics, Columbia University Irving Medical Center, New York, NY, 10032, USA.

出版信息

bioRxiv. 2025 Mar 19:2025.03.19.644215. doi: 10.1101/2025.03.19.644215.

Abstract

Homologous recombination (HR) is essential for the maintenance of genome stability and for generating genetic diversity during meiosis. The eukaryotic protein Rad51 is member of the Rad51/RecA family of DNA recombinases and is responsible for guiding the DNA pairing reactions that take place in HR during mitosis. Dmc1 is a meiosis-specific paralog of Rad51 and is responsible for the DNA pairing reactions that take place in HR during meiosis. Rad51 and Dmc1 are both ATP-dependent DNA-binding proteins and both form extended helical filaments on ssDNA which are key intermediates in HR. The stability of these nucleoprotein filaments is highly regulated and is also tightly coupled to nucleotide binding and hydrolysis. ATP binding promotes filament assembly whereas the hydrolysis of ATP to ADP reduces filament stability to promote filament disassembly. Here, we present CryoEM structures of the recombinases Rad51 and Dmc1 in the ADP-bound states and provide a detailed structural comparison to the ATP-bound filaments. Our findings yield insights into the structural transitions that take place during the hydrolysis of ATP to ADP and suggest a new model for how these structural changes may be linked to nucleoprotein filament disassembly.

摘要

同源重组(HR)对于维持基因组稳定性以及在减数分裂过程中产生遗传多样性至关重要。真核生物蛋白Rad51是DNA重组酶的Rad51/RecA家族成员,负责指导有丝分裂期间HR中发生的DNA配对反应。Dmc1是Rad51的减数分裂特异性旁系同源物,负责减数分裂期间HR中发生的DNA配对反应。Rad51和Dmc1都是ATP依赖性DNA结合蛋白,并且都在单链DNA上形成延伸的螺旋丝,这是HR中的关键中间体。这些核蛋白丝的稳定性受到高度调节,并且也与核苷酸结合和水解紧密相关。ATP结合促进丝的组装,而ATP水解为ADP则降低丝的稳定性以促进丝的解聚。在这里,我们展示了处于ADP结合状态的重组酶Rad51和Dmc1的冷冻电镜结构,并与ATP结合的丝进行了详细的结构比较。我们的研究结果深入了解了ATP水解为ADP过程中发生的结构转变,并提出了一个新模型,说明这些结构变化可能如何与核蛋白丝的解聚相关联。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8dc7/11957116/6307aff7369d/nihpp-2025.03.19.644215v1-f0001.jpg

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