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从宏基因组学角度看,微塑料生物膜作为塑料生物降解和氮循环的潜在热点

Microplastic biofilms as potential hotspots for plastic biodegradation and nitrogen cycling: a metagenomic perspective.

作者信息

Fortin Samantha G, Uhlig Kelley, Hale Robert C, Song Bongkeun

机构信息

Virginia Institute of Marine Science, William and Mary, Gloucester Point, Virginia 23062, United States.

出版信息

FEMS Microbiol Ecol. 2025 Apr 14;101(5). doi: 10.1093/femsec/fiaf035.

DOI:10.1093/femsec/fiaf035
PMID:40175313
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11995698/
Abstract

Microplastics are an emerging contaminant worldwide, with the potential to impact organisms and facilitate the sorption and release of chemicals. Additionally, they create a novel habitat for microbial communities, forming biofilms known as the plastisphere. While the plastisphere has been studied in select aquatic environments, those in estuarine ecosystems merit additional attention due to their proximity to plastic debris sources. Additionally, the role plastisphere communities play in nutrient cycling has rarely been examined. This study used metagenomic analysis to investigate the taxonomic composition and functional genes of developing plastisphere communities living on petroleum-based (polyethylene and polyvinyl chloride) and biopolymer-based (polylactic acid) substrates. Isolated metagenome-assembled genomes (MAGs) showed plastisphere communities have the genes necessary to perform nitrification and denitrification and degrade petroleum and biopolymer-based plastics. The functions of these plastispheres have implications for estuarine nitrogen cycling and provide a possible explanation for the plastisphere microbes' competitiveness in biofilm environments. Overall, microplastics in the estuarine system provide a novel habitat for microbial communities and associated nitrogen cycling, facilitating the growth of microbes with plastic-degrading capabilities.

摘要

微塑料是一种在全球范围内新兴的污染物,有可能影响生物并促进化学物质的吸附和释放。此外,它们为微生物群落创造了一个新的栖息地,形成了被称为塑料圈的生物膜。虽然已经在特定的水生环境中对塑料圈进行了研究,但由于河口生态系统靠近塑料碎片来源,因此值得更多关注。此外,塑料圈群落对养分循环的作用很少被研究。本研究使用宏基因组分析来调查生活在石油基(聚乙烯和聚氯乙烯)和生物聚合物基(聚乳酸)基质上的发育中的塑料圈群落的分类组成和功能基因。分离出的宏基因组组装基因组(MAG)表明,塑料圈群落拥有进行硝化和反硝化以及降解石油和生物聚合物基塑料所需的基因。这些塑料圈的功能对河口氮循环有影响,并为塑料圈微生物在生物膜环境中的竞争力提供了一种可能的解释。总体而言,河口系统中的微塑料为微生物群落和相关的氮循环提供了一个新的栖息地,促进了具有塑料降解能力的微生物的生长。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/fcc41f0ae73f/fiaf035fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/45f41f9b8988/fiaf035fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/ad236d4c08af/fiaf035fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/78e7d2201d01/fiaf035fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/5ddb207584af/fiaf035fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/fcc41f0ae73f/fiaf035fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/45f41f9b8988/fiaf035fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/ad236d4c08af/fiaf035fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/78e7d2201d01/fiaf035fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/5ddb207584af/fiaf035fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/11995698/fcc41f0ae73f/fiaf035fig5.jpg

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本文引用的文献

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Unveiling microplastic's role in nitrogen cycling: Metagenomic insights from estuarine sediment microcosms.揭示微塑料在氮循环中的作用:来自河口沉积物微宇宙的宏基因组学见解。
Environ Pollut. 2024 Oct 15;359:124591. doi: 10.1016/j.envpol.2024.124591. Epub 2024 Jul 21.
2
Microplastics in marine mammal blubber, melon, & other tissues: Evidence of translocation.海洋哺乳动物的鲸脂、瘤胃及其他组织中的微塑料:转移的证据。
Environ Pollut. 2023 Oct 15;335:122252. doi: 10.1016/j.envpol.2023.122252. Epub 2023 Aug 2.
3
Microbial colonization and degradation of marine microplastics in the plastisphere: A review.
海洋微塑料在塑料球中的微生物定殖与降解:综述
Front Microbiol. 2023 Feb 17;14:1127308. doi: 10.3389/fmicb.2023.1127308. eCollection 2023.
4
Microplastics exacerbate virus-mediated mortality in fish.微塑料会加剧鱼类因病毒介导的死亡。
Sci Total Environ. 2023 Mar 25;866:161191. doi: 10.1016/j.scitotenv.2022.161191. Epub 2022 Dec 30.
5
Blooms of the harmful algae Margalefidinium polykrikoides and Alexandrium monilatum alter the York River Estuary microbiome.有害藻类聚球藻和亚历山大藻的大量繁殖改变了约克河口的微生物组。
Harmful Algae. 2022 May;114:102216. doi: 10.1016/j.hal.2022.102216. Epub 2022 Mar 9.
6
PlasticDB: a database of microorganisms and proteins linked to plastic biodegradation.塑料数据库(PlasticDB):一个与塑料生物降解相关的微生物和蛋白质数据库。
Database (Oxford). 2022 Mar 1;2022. doi: 10.1093/database/baac008.
7
Relative Influence of Plastic Debris Size and Shape, Chemical Composition and Phytoplankton-Bacteria Interactions in Driving Seawater Plastisphere Abundance, Diversity and Activity.塑料碎片大小和形状、化学成分以及浮游植物与细菌相互作用对海水塑料球丰度、多样性和活性的相对影响
Front Microbiol. 2021 Jan 13;11:610231. doi: 10.3389/fmicb.2020.610231. eCollection 2020.
8
Spatial and seasonal variations in biofilm formation on microplastics in coastal waters.沿海海域微塑料上生物膜形成的空间和季节性变化。
Sci Total Environ. 2021 May 20;770:145303. doi: 10.1016/j.scitotenv.2021.145303. Epub 2021 Jan 22.
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Microplastics and other anthropogenic particles in the surface waters of the Chesapeake Bay.切萨皮克湾地表水的微塑料和其他人为颗粒。
Mar Pollut Bull. 2020 Jul;156:111257. doi: 10.1016/j.marpolbul.2020.111257. Epub 2020 May 16.
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Microplastics affect sedimentary microbial communities and nitrogen cycling.微塑料影响沉积物中的微生物群落和氮循环。
Nat Commun. 2020 May 12;11(1):2372. doi: 10.1038/s41467-020-16235-3.