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论α-氧化铝在生命起源中的作用:氨基酸的表面驱动组装

On the role of α-alumina in the origin of life: Surface-driven assembly of amino acids.

作者信息

Wang Ruiyu, Remsing Richard C, Klein Michael L, Borguet Eric, Carnevale Vincenzo

机构信息

Department of Chemistry, Temple University, Philadelphia, PA 19122, USA.

Center for Complex Materials from First Principles (CCM), Temple University, Philadelphia, PA 19122, USA.

出版信息

Sci Adv. 2025 Apr 11;11(15):eadt4151. doi: 10.1126/sciadv.adt4151.

Abstract

We investigate the hypothesis that mineral/water interfaces played a crucial catalytic role in peptide formation by promoting the self-assembly of amino acids. Using classical molecular dynamics simulations, we demonstrate that the α-alumina(0001) surface exhibits an affinity of 4 for individual glycine or GG dipeptide molecules due to hydrogen bonds. In simulations with multiple glycine molecules, surface-bound glycine enhances further adsorption, leading to the formation of long chains connected by hydrogen bonds between the carboxyl and amine groups of glycine molecules. We find that the likelihood of observing chains longer than 10 glycine units increases by at least five orders of magnitude at the surface compared to the bulk. This surface-driven assembly is primarily due to local high density and alignment with the alumina surface pattern. Together, these results propose a model for how mineral surfaces can induce configuration-specific assembly of amino acids, thereby promoting condensation reactions.

摘要

我们研究了这样一种假设,即矿物/水界面通过促进氨基酸的自组装在肽的形成过程中发挥了关键的催化作用。通过经典分子动力学模拟,我们证明α-氧化铝(0001)表面由于氢键作用对单个甘氨酸或甘氨酰甘氨酸二肽分子具有4的亲和力。在含有多个甘氨酸分子的模拟中,表面结合的甘氨酸会增强进一步的吸附,导致形成由甘氨酸分子的羧基和胺基之间的氢键连接的长链。我们发现,与本体相比,在表面观察到长度超过10个甘氨酸单元的链的可能性增加了至少五个数量级。这种表面驱动的组装主要是由于局部高密度以及与氧化铝表面图案的对齐。总之,这些结果提出了一个关于矿物表面如何诱导氨基酸进行构型特异性组装从而促进缩合反应的模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bc1/11988445/54f0a3d6c5b9/sciadv.adt4151-f1.jpg

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