Ren Xiaodong, Liu Xiao, Che Yanqing, Yang Luyao, Mao Yixin, Li Mengjie, Sun Zhiwen, Bai Xuemei, Gao He, Wang Yimin, Wang Duochun
School of Public Health, Lanzhou University, Lanzhou City, Gansu Province, China.
National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
China CDC Wkly. 2025 Mar 28;7(13):413-421. doi: 10.46234/ccdcw2025.069.
, or group B Streptococcus (GBS), can cause severe infections in humans, yet comprehensive genomic characterization from China remains limited. This study presents an extensive genomic analysis of GBS isolates collected in China from 1998 to 2024.
GBS genomes were obtained from public databases and through de novo sequencing. Serotype confirmation was conducted via pan-genomic analysis, phylogenetic relationships were established using maximum-likelihood methodology, and virulence and antibiotic resistance genes were identified through the Virulence Factor Database and Comprehensive Antibiotic Resistance Database. Statistical analyses were performed using SPSS 26.0, primarily employing Fisher's exact tests.
Analysis of 747 GBS genomes revealed eight serotypes (Ia, Ib, II, III, IV, V, VI, VII) and nontypeable strains. Serotypes III, Ib, Ia, V, and II constituted 96.65% of all isolates. GBS prevalence remained low from 1998-2011 but increased substantially after 2012. Geographic distribution demonstrated significant regional heterogeneity. Phylogenetic analysis categorized the 747 genomes into five distinct lineages, with lineage 5 being predominant. Six virulence factor categories encompassing 56 virulence-associated genes were identified, with 33 genes present in nearly all genomes. Twenty-seven antibiotic resistance genes spanning nine drug classes were detected, particularly those conferring resistance to peptides and macrolide antibiotics, indicating widespread antimicrobial resistance mechanisms in GBS.
GBS infections in China exhibit serotype distributions similar to global patterns but with notable regional variations. This comprehensive genomic characterization provides critical insights for developing targeted prevention strategies and treatment approaches for GBS infections in China.
B族链球菌(GBS)可导致人类严重感染,但来自中国的全面基因组特征分析仍然有限。本研究对1998年至2024年在中国收集的GBS分离株进行了广泛的基因组分析。
从公共数据库和通过从头测序获得GBS基因组。通过泛基因组分析进行血清型确认,使用最大似然法建立系统发育关系,并通过毒力因子数据库和综合抗生素抗性数据库鉴定毒力和抗生素抗性基因。使用SPSS 26.0进行统计分析,主要采用Fisher精确检验。
对747个GBS基因组的分析揭示了8种血清型(Ia、Ib、II、III、IV、V、VI、VII)和不可分型菌株。血清型III、Ib、Ia、V和II占所有分离株的96.65%。1998 - 2011年GBS患病率较低,但2012年后大幅上升。地理分布显示出显著的区域异质性。系统发育分析将747个基因组分为五个不同的谱系,其中谱系5占主导地位。鉴定出包含56个毒力相关基因的六个毒力因子类别,其中33个基因几乎存在于所有基因组中。检测到跨越九类药物的27个抗生素抗性基因,特别是那些赋予对肽类和大环内酯类抗生素抗性的基因,表明GBS中存在广泛的抗菌抗性机制。
中国的GBS感染表现出与全球模式相似的血清型分布,但存在显著的区域差异。这种全面的基因组特征分析为制定中国GBS感染的针对性预防策略和治疗方法提供了关键见解。