Sakae Kohtaro, Kitagami Yudai, Matsuda Yosuke
Laboratory of Forest Mycology, Graduate School of Bioresources, Mie University, 1577 Kurimamachiya, Tsu, Mie, 514 - 8507, Japan.
Microb Ecol. 2025 Apr 14;88(1):28. doi: 10.1007/s00248-025-02526-z.
Rhizosphere bacteria work in synergy with mycorrhizal fungi to promote plant growth. The community structure of rhizosphere bacteria may be influenced by continuous changes in fungal associations with host plants. Asiatic herbaceous plant Pyrola japonica (Ericaceae) forms arbutoid mycorrhizas without fungal mantles, with its mycorrhizal development being visually distinguishable at the cellular level. This study aimed to investigate roles of rhizosphere bacteria and their community shifts along with mycorrhizal developments. We examined bacterial communities at three different developmental stages of mycorrhizal roots-limited, full, and digested-via a partial 16S rRNA amplicon sequencing. Both α- and β-diversities in the full condition were significantly lower than those in the limited and digested conditions. Significant clusters of bacterial compositions were found among all treatments. In terms of ecological processes of community assembly, communities in limited conditions and bulk soil were influenced by both deterministic and stochastic processes, whereas those in full and digested conditions were regulated only by stochastic ways. Furthermore, the order Rhizobiales and Actinomycetales known as mycorrhizal helper bacteria were characterized in the full and digested conditions through phylogenetic analysis and detection of indicator taxa. These results suggest that mycorrhizal fungi may play ecologically important roles not only as temporal drivers initiating the formation rhizosphere bacterial communities but also as key founders exerting continuous influences to establish priority effects. Moreover, the rhizosphere bacterial community remains after mycorrhizal degeneration and their historical continuity may contribute to maintaining plant-mycorrhizal fungi-bacterial associations.
根际细菌与菌根真菌协同作用以促进植物生长。根际细菌的群落结构可能会受到真菌与宿主植物关联的持续变化的影响。亚洲草本植物日本鹿蹄草(鹿蹄草科)形成无真菌套的石楠状菌根,其菌根发育在细胞水平上肉眼可辨。本研究旨在调查根际细菌的作用及其群落随菌根发育的变化。我们通过部分16S rRNA扩增子测序检查了菌根根的三个不同发育阶段——受限、完全和消解阶段的细菌群落。完全状态下的α多样性和β多样性均显著低于受限和消解状态。在所有处理中均发现了细菌组成的显著聚类。就群落组装的生态过程而言,受限条件下的群落和根际土壤受到确定性和随机性过程的影响,而完全和消解条件下的群落仅由随机方式调节。此外,通过系统发育分析和指示类群检测,在完全和消解条件下鉴定出了被称为菌根辅助细菌的根瘤菌目和放线菌目。这些结果表明,菌根真菌不仅可能作为启动根际细菌群落形成的时间驱动因素发挥重要生态作用,而且可能作为关键的奠基者发挥持续影响以建立优先效应。此外,菌根退化后根际细菌群落仍然存在,其历史连续性可能有助于维持植物-菌根真菌-细菌的关联。