Dai Wenqiang, Li Yaoling, Chen Zhenghan, He Fuqiang, Wang Hui, Peng Jiali, Liu Kai, Wang Hongxia, An Xiuhong, Zhao Shugang
College of Life Sciences, Hebei Agricultural University, Baoding, 071001, China.
College of Biochemical and Environmental Engineering, Baoding University, Baoding, 071001, China.
BMC Genomics. 2025 Apr 14;26(1):370. doi: 10.1186/s12864-025-11518-9.
Plant responses to biotic and abiotic stresses are complex processes. Previous studies have shown that the LBD gene family plays important roles in plant growth and development as well as in plant defense against biotic and abiotic stresses. The expression of LBD genes was investigated in walnuts under biotic and abiotic stresses, revealing that LBD38-1 may be a key gene in the plant stress response. This study provides new insights into the roles of LBD genes in plant responses to biotic stress.
Forty-nine members of the JrLBD gene family were identified in the walnut genome and classified into six subfamilies. Comparative homology analysis through phylogenetic trees revealed that the presence of Group I-a and Group VI plays an important role in resistance to stressors. The expression of walnut LBD genes under cold-temperature, high-temperature, mechanical damage, and biotic stresses was analyzed via transcriptome sequencing, and the expression of JrLBD38-1 in the Group VI subfamily was particularly prominent. According to transcriptome profile analysis, JrLBD38-1 is highly expressed in different tissues of walnuts, suggesting that it plays a regulatory role in the growth and development of different tissues. The function of the Gibberellin (GA) response element in the JrLBD38-1 promoter was further analyzed and verified. These findings confirmed that GA regulated JrLBD38-1 expression changes during Xanthomonas arboricola pv. juglandis infestation of walnut leaves.
Forty-nine walnut JrLBDs were identified and classified into six subfamilies. JrLBD38-1 has GA-inducible expression, is regulated by GA under pathogenic bacterial stress, and is involved in the response to biotic stress. This function of JrLBD38-1 provides new insights into walnut disease resistance mechanisms.
植物对生物和非生物胁迫的反应是复杂的过程。先前的研究表明,LBD基因家族在植物生长发育以及植物对生物和非生物胁迫的防御中发挥重要作用。对核桃在生物和非生物胁迫下LBD基因的表达进行了研究,发现LBD38 - 1可能是植物胁迫反应中的关键基因。本研究为LBD基因在植物对生物胁迫反应中的作用提供了新的见解。
在核桃基因组中鉴定出49个JrLBD基因家族成员,并分为六个亚家族。通过系统发育树进行的比较同源性分析表明,I - a组和VI组的存在在对抗应激源方面起重要作用。通过转录组测序分析了核桃LBD基因在低温、高温、机械损伤和生物胁迫下的表达,VI亚家族中的JrLBD38 - 1表达尤为突出。根据转录组图谱分析,JrLBD38 - 1在核桃的不同组织中高表达,表明它在不同组织的生长发育中起调节作用。进一步分析并验证了JrLBD38 - 1启动子中赤霉素(GA)反应元件的功能。这些发现证实了GA在核桃叶被核桃细菌性黑斑病菌侵染期间调节JrLBD38 - 1的表达变化。
鉴定出49个核桃JrLBDs并分为六个亚家族。JrLBD38 - 1具有GA诱导型表达,在病原菌胁迫下受GA调控,并参与生物胁迫反应。JrLBD38 - 1的这一功能为核桃抗病机制提供了新的见解。