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使用CRISPR/Cas12i3系统对小鼠胚胎进行基因组编辑

Genome Editing in Mouse Embryo Using the CRISPR/Cas12i3 System.

作者信息

He Jiale, Liu Juan, Yue Yuan, Wang Lin, Liu Zhize, Xi Guangyin, An Lei, Tian Jianhui, Wang Yinjuan

机构信息

Frontiers Science Center for Molecular Design Breeding (MOE), Key Laboratory of Animal Genetics, Breeding and Reproduction of the Ministry of Agriculture and Rural Affairs, National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.

出版信息

Int J Mol Sci. 2025 Mar 26;26(7):3036. doi: 10.3390/ijms26073036.

DOI:10.3390/ijms26073036
PMID:40243700
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11988942/
Abstract

The CRISPR/Cas system is a sizable family that is currently a popular and efficient gene editing tool. Cas12i3, as a member of the Type V-I family, has the characteristics of recognizing T-rich PAM sequences and being guided by shorter crRNA and has higher gene editing efficiency than Cas9 in rice. However, as a potential tool in accelerating the breeding process, the application of Cas12i3 in mammalian embryos has not yet been reported. Our study systematically evaluated the feasibility of applying CRISPR/Cas12i3 to gene editing in mouse embryos, with the core pluripotency regulator gene as the target. We successfully constructed a loss-of-function mouse embryo model using CRISPR/Cas12i3. At the targeted locus, its editing efficiency exceeded that of the Cas9 system under matched experimental conditions; no off-target phenomenon was detected. Moreover, the Cas12i3 system exhibited no side effect on mouse embryo development and proliferation of blastocyst cells. Finally, we obtained healthy chimeric gene-edited offspring by optimizing the concentration of the Cas12i3 mixture. These results confirm the feasibility and safety of CRISPR/Cas12i3 for gene editing in mammals, which provides a reliable tool for one-step generation of gene-edited animals for applications in biology, medical research, and large livestock breeding.

摘要

CRISPR/Cas系统是一个规模较大的家族,目前是一种流行且高效的基因编辑工具。Cas12i3作为V-I型家族的成员,具有识别富含T的PAM序列以及由较短的crRNA引导的特性,并且在水稻中具有比Cas9更高的基因编辑效率。然而,作为加速育种过程的一种潜在工具,Cas12i3在哺乳动物胚胎中的应用尚未见报道。我们的研究系统地评估了将CRISPR/Cas12i3应用于小鼠胚胎基因编辑的可行性,以核心多能性调节基因作为靶点。我们使用CRISPR/Cas12i3成功构建了一个功能缺失的小鼠胚胎模型。在靶向位点,其编辑效率在匹配的实验条件下超过了Cas9系统;未检测到脱靶现象。此外,Cas12i3系统对小鼠胚胎发育和囊胚细胞增殖没有副作用。最后,我们通过优化Cas12i3混合物的浓度获得了健康的嵌合基因编辑后代。这些结果证实了CRISPR/Cas12i3用于哺乳动物基因编辑的可行性和安全性,为一步生成用于生物学、医学研究和大型家畜育种的基因编辑动物提供了可靠工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/0bdc70ffbcc5/ijms-26-03036-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/66a47f027a09/ijms-26-03036-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/e5fb894bd2ea/ijms-26-03036-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/3919465eb68d/ijms-26-03036-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/266f1a812d19/ijms-26-03036-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/0bdc70ffbcc5/ijms-26-03036-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/66a47f027a09/ijms-26-03036-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/e5fb894bd2ea/ijms-26-03036-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/3919465eb68d/ijms-26-03036-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/266f1a812d19/ijms-26-03036-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2367/11988942/0bdc70ffbcc5/ijms-26-03036-g005.jpg

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本文引用的文献

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Engineering a robust Cas12i3 variant-mediated wheat genome editing system.构建一个强大的Cas12i3变体介导的小麦基因组编辑系统。
Plant Biotechnol J. 2025 Mar;23(3):860-873. doi: 10.1111/pbi.14544. Epub 2024 Dec 17.
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The type V effectors for CRISPR/Cas-mediated genome engineering in plants.植物中 CRISPR/Cas 介导的基因组工程的 V 型效应因子。
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Application of CRISPR/Cas12i.3 for targeted mutagenesis in broomcorn millet (Panicum miliaceum L.).
CRISPR/Cas12i.3 在谷子(Panicum miliaceum L.)基因定点突变中的应用。
J Integr Plant Biol. 2024 Aug;66(8):1544-1547. doi: 10.1111/jipb.13669. Epub 2024 May 2.
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Breeding exceptionally fragrant soybeans for soy milk with strong aroma.培育具有浓郁香气的豆浆专用香浓大豆。
J Integr Plant Biol. 2024 Apr;66(4):642-644. doi: 10.1111/jipb.13631. Epub 2024 Feb 23.
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An engineered Cas12i nuclease that is an efficient genome editing tool in animals and plants.一种经过工程改造的Cas12i核酸酶,它是一种在动物和植物中高效的基因组编辑工具。
Innovation (Camb). 2024 Jan 8;5(2):100564. doi: 10.1016/j.xinn.2024.100564. eCollection 2024 Mar 4.
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A 3D "sandwich" co-culture system with vascular niche supports mouse embryo development from E3.5 to E7.5 in vitro.一种具有血管龛的 3D“三明治”共培养系统可支持体外 E3.5 至 E7.5 的小鼠胚胎发育。
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Improve meat production and virus resistance by simultaneously editing multiple genes in livestock using Cas12i.利用 Cas12i 同时编辑家畜中的多个基因以提高肉质产量和抗病毒能力。
Sci China Life Sci. 2024 Mar;67(3):555-564. doi: 10.1007/s11427-023-2407-0. Epub 2023 Nov 17.
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Genome editing in rice using CRISPR/Cas12i3.利用 CRISPR/Cas12i3 在水稻中进行基因组编辑。
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