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加强社会暴露与基于大脑的健康结果的全表观基因组关联研究中的严谨性和可重复性。

Strengthening Rigor and Reproducibility in Epigenome-Wide Association Studies of Social Exposures and Brain-Based Health Outcomes.

作者信息

McKenna Brooke G, Lussier Alexandre A, Suderman Matthew J, Walton Esther, Simpkin Andrew J, Hüls Anke, Dunn Erin C

机构信息

Center for Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA.

Department of Psychiatry, Harvard Medical School, Boston, MA, USA.

出版信息

Curr Environ Health Rep. 2025 Apr 21;12(1):19. doi: 10.1007/s40572-024-00469-0.

Abstract

PURPOSE OF REVIEW

Studies examining the effects of social factors on the epigenome have proliferated over the last two decades. Social epigenetics research to date has broadly demonstrated that social factors spanning childhood adversity, to neighborhood disadvantage, educational attainment, and economic instability are associated with alterations to DNA methylation that may have a functional impact on health. These relationships are particularly relevant to brain-based health outcomes such as psychiatric disorders, which are strongly influenced by social exposures and are also the leading cause of disability worldwide. However, social epigenetics studies are limited by the many challenges faced by both epigenome-wide association studies (EWAS) and the study of social factors.

FINDINGS

In this manuscript, we provide a framework to achieve greater rigor and reproducibility in social epigenetics research. We discuss current limitations of the social epigenetics field, as well as existing and new solutions to improve rigor and reproducibility. Readers will gain a better understanding of the current considerations and processes that could maximize rigor when conducting social epigenetics research, as well as the technologies and approaches that merit attention and investment to propel continued discovery into the future.

摘要

综述目的

在过去二十年中,研究社会因素对表观基因组影响的研究大量涌现。迄今为止,社会表观遗传学研究广泛表明,从童年逆境到邻里劣势、教育程度和经济不稳定等社会因素与DNA甲基化改变有关,这些改变可能对健康产生功能性影响。这些关系与基于大脑的健康结果(如精神疾病)尤为相关,精神疾病受到社会暴露的强烈影响,也是全球致残的主要原因。然而,社会表观遗传学研究受到表观基因组全关联研究(EWAS)和社会因素研究面临的诸多挑战的限制。

研究结果

在本手稿中,我们提供了一个框架,以在社会表观遗传学研究中实现更高的严谨性和可重复性。我们讨论了社会表观遗传学领域当前的局限性,以及提高严谨性和可重复性的现有和新解决方案。读者将更好地理解在进行社会表观遗传学研究时当前可使严谨性最大化的考虑因素和过程,以及值得关注和投资以推动未来持续发现的技术和方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/12009779/fbe1da9bb91f/40572_2024_469_Fig1_HTML.jpg

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