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探索益生菌中的组学方法:当代进展与未来途径。

Exploring omics approaches in probiotics: Contemporary developments and prospective pathways.

作者信息

Verma Ishita, Banerjee Bhargabi, Singh Arushi, Kannan Priya, Saleena Lilly M

机构信息

Department of Biotechnology, School of Bioengineering, College of Engineering and Technology, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu, India.

Department of Biotechnology, School of Bioengineering, College of Engineering and Technology, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu, India.

出版信息

J Microbiol Methods. 2025 Jul;232-234:107135. doi: 10.1016/j.mimet.2025.107135. Epub 2025 Apr 19.

Abstract

The application of omics technologies in combination with bench investigations has brought about a significant transformation in the field of probiotics, enabling a thorough investigation of the basic elements contributing to the probiotic activity. Genomics studies have decoded the complete set of genes of probiotic organisms, shedding light on beneficial traits and mechanisms of probiotic action. Transcriptomics analyses focus on gene expression patterns and investigate probiotic adaptation and functionality. Proteomic studies have revealed the intricate connections between proteins in probiotic cells and their relationship with the host environment. Metabolomic profiling has provided a comprehensive perspective on the metabolic pathways related to probiotic metabolism and the production of bioactive substances. The ongoing development of omics technology presents exciting opportunities for probiotic research, as it allows for a deeper exploration of probiotic-host interactions and the creation of advanced and tailored probiotics that offer specific health advantages. A comprehensive analysis of recent progress in genomics, transcriptomics, proteomics, and metabolomics related to probiotics is presented in this review.

摘要

组学技术与实验室研究相结合的应用给益生菌领域带来了重大变革,使得对促成益生菌活性的基本要素能够进行全面研究。基因组学研究已解码益生菌生物体的全套基因,揭示了有益特性和益生菌作用机制。转录组学分析聚焦于基因表达模式,并研究益生菌的适应性和功能。蛋白质组学研究揭示了益生菌细胞中蛋白质之间的复杂联系及其与宿主环境的关系。代谢组学分析提供了与益生菌代谢及生物活性物质产生相关的代谢途径的全面视角。组学技术的不断发展为益生菌研究带来了令人兴奋的机遇,因为它能够更深入地探索益生菌与宿主的相互作用,并创造出具有特定健康优势的先进且定制化的益生菌。本综述对与益生菌相关的基因组学、转录组学、蛋白质组学和代谢组学的最新进展进行了全面分析。

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