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RNA编辑产生具有不同稳定性的mRNA异构体,这可能会扩大物种中mRNA和蛋白质的耐热性。

RNA editing generates mRNA isoforms with distinct stabilities that may expand the thermal tolerance of mRNA and proteins in species.

作者信息

Liao Ming-Ling, Zhu Ya-Jie, Zhu Xiao-Lu, Somero George N, Dong Yun-Wei

机构信息

Key Laboratory of Mariculture of Ministry of Education, Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China.

Shandong Key Laboratory of Green Mariculture and Smart Fishery, Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China. E-mail:

出版信息

Zool Res. 2025 May 18;46(3):527-537. doi: 10.24272/j.issn.2095-8137.2024.383.

Abstract

Ectothermic organisms may expand their thermal tolerance by producing multiple protein isoforms with differing thermal sensitivities. While such isoforms commonly originate from allelic variation at a single locus (allozymes) or from gene duplication that gives rise to paralogs with distinct thermal responses, this study investigated mRNA editing as an alternative, post-transcriptional mechanism for generating mRNA variants. Cytosolic malate dehydrogenase (cMDH) was examined in foot tissue of two congeners of the marine mussel genus , which occupy different thermal environments. Multiple editing events were detected within the mRNA coding region in both species. Editing sites were species-specific, with no shared positions identified. In , editing occurred at 117, 123, 135, 190, 195, 204, 279, and 444, while in , editing was detected at 216 and 597. Each species exhibited multiple edited mRNA variants, and these isoforms were associated with differential protein expression. These findings suggest that mRNA editing may contribute an additional layer of molecular variation. The generation of diverse mRNA isoforms from a single DNA coding sequence may enhance enzymatic flexibility across temperature ranges, supporting eurythermal physiological performance and mitigating thermal stress. Moreover, the presence of multiple edited transcripts within individual organisms raises important caveats about the limitations of approaches that deduce amino acid sequences or estimate adaptive variation solely from genomic data.

摘要

变温生物可以通过产生具有不同热敏感性的多种蛋白质异构体来扩展其热耐受性。虽然这些异构体通常源自单个基因座的等位基因变异(同工酶)或基因复制,从而产生具有不同热反应的旁系同源物,但本研究调查了mRNA编辑作为一种替代性的转录后机制,用于产生mRNA变体。在海洋贻贝属的两个同属物种的足部组织中检测了胞质苹果酸脱氢酶(cMDH),这两个物种占据不同的热环境。在两个物种的mRNA编码区域内均检测到多个编辑事件。编辑位点具有物种特异性,未发现共享位置。在[物种A]中,编辑发生在117、123、135、190、195、204、279和444位点,而在[物种B]中,在216和597位点检测到编辑。每个物种都表现出多种编辑后的mRNA变体,并且这些异构体与不同的蛋白质表达相关。这些发现表明,mRNA编辑可能会增加分子变异的层面。从单个DNA编码序列产生多样的mRNA异构体可能会增强酶在不同温度范围内的灵活性,支持广温生理性能并减轻热应激。此外,个体生物体内存在多个编辑后的转录本,这对仅从基因组数据推断氨基酸序列或估计适应性变异的方法的局限性提出了重要的警示。

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