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酶促双氧杂狄尔斯-阿尔德反应构建了(-)-蒽并苯并恶嗪酮的氧桥三环缩醛单元。

An enzymatic dual-oxa Diels-Alder reaction constructs the oxygen-bridged tricyclic acetal unit of (-)-anthrabenzoxocinone.

作者信息

Yan Xiaoli, Jia Xinying, Luo Zhenyao, Ji Shunjia, Zhang Meng-Jie, Zhang Hui, Yu Mingjia, Orts Julien, Jiang Kai, Lin Zhi, Deng Zixin, Kong Xu-Dong, Kobe Bostjan, Zhao Yi-Lei, Mobli Mehdi, Qu Xudong

机构信息

State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.

Key Laboratory of Combinatorial Biosynthesis and Drug Discovery Ministry of Education, School of Pharmaceutical Sciences, Wuhan University, Wuhan, China.

出版信息

Nat Chem. 2025 Apr 22. doi: 10.1038/s41557-025-01804-0.

Abstract

The hetero-Diels-Alder (HDA) reaction is a key method for synthesizing six-membered heterocyclic rings in natural products and bioactive compounds. Despite its importance in synthetic chemistry, naturally occurring enzymatic HDA reactions are rare and limited to a single heteroatom. Here we report AbxF, a bifunctional vicinal oxygen chelate (VOC)-like protein that catalyses dehydration and dual-oxa Diels-Alder reactions to stereoselectively form the oxygen-bridged tricyclic acetal of (-)-anthrabenzoxocinone ((-)-ABX). Isotope assays and density functional theory calculations reveal a dehydration-coordinated, concerted HDA mechanism. The crystal structure of AbxF and NMR complex structures of AbxF with its substrate analogue and (-)-ABX define the reaction's structural basis. Mutational analysis identifies Asp17 as a general base that mediates dehydration, forming an o-quinone methide intermediate for stereoselective dual-oxa HDA. This work establishes the molecular and structural basis of a polyheteroatomic Diels-Alderase, paving the way for designing polyheteroatomic DA enzymatic tools.

摘要

杂环狄尔斯-阿尔德(HDA)反应是合成天然产物和生物活性化合物中六元杂环的关键方法。尽管其在合成化学中很重要,但天然存在的酶促HDA反应很少见,并且仅限于单个杂原子。在此,我们报道了AbxF,一种双功能邻位氧螯合物(VOC)样蛋白,它催化脱水和双氧杂狄尔斯-阿尔德反应,以立体选择性地形成(-)-蒽并苯并恶嗪酮((-)-ABX)的氧桥连三环缩醛。同位素分析和密度泛函理论计算揭示了一种脱水协同的协同HDA机制。AbxF的晶体结构以及AbxF与其底物类似物和(-)-ABX的NMR复合物结构定义了该反应的结构基础。突变分析确定Asp17为介导脱水的通用碱,形成用于立体选择性双氧杂HDA的邻醌甲基化物中间体。这项工作建立了多杂原子狄尔斯-阿尔德酶的分子和结构基础,为设计多杂原子DA酶工具铺平了道路。

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